Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02228 atggaagggagagagagTTGTCACCCATTGCTGAAAGGTGGTAGGAGAAGAGAGAAAGGATACAGCCATGGCTTATCCACCACTCAAATGCATGTCATGGCTTCCATTTGTGATACCCTCTTTCCTTCTCTGCCACTCAACAACCAAAATTCACAACACCAACCTCTCTCAACCTTCTACAATACCTCTGCTTCTCAACTCCCTTTTCCTGATGAGACTGCAGAGCTGTTGTTCAAGAGGTGTTTGCCAGAAGCAGTGTCGTTGGTGAGTTGGGTTCTGTGGATTCTGTCGTTCAGATTGGGAACACTGCTGCTGTGTGGAAGGCTTTGCTTGGATTGGAAGTGGCCTTTCATTAACAAATTCTCTGAGATTTCATTGGACAAGAGAGAAGAGATTCTCAAGAAATGGTCGAGGGAAAAGCGTTGGGTGCCCCTACGGCTAGTGTTTGTGGTCATCAAACTTGTTTTCTTCTATAATTTCTTCTCAAGGGCTGATGTAAATGGGTATAATCCCGCATGGAAAGCAATTGGATACCAGGTGGACAGCAAGGAAAAGTTGAAAAGAAAGGAAAGGCCTCTCCAAAAAGGATTAATAGAGACTACGTACGAAACTGATTCTACTTTAATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCAGTGAAGATAAAAGGCAGAACCTATACAAGGTCAAATGTGATGTTGTCATTGTGGGGTCTGGTTGTGGAGGAGGAGTTGCAGCTGCAGTTCTTGCAAACTCTGgcaatggtgcagTGATCCTCACCGGATGTAAAGCTGAGAAATTCATATTGGAAGATGGAAAGGGTGGAATGAAGAAAAAGAATTGCTTAGGAGTGATTGCTTCTGCAACTTGGAGGAGTAAGGTAACAATGAAACTCCAAATTGAATCCAAGGTAACCATTTCAGCATGTGGCTCTCTCTCCACTCCTCCTCTAATGATTTCTAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCTGTTCAATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTGAGCGGTAATAACTATGAGGGTGGAATCATAACTTCAATCCACAAGGTATTTGCTGAGGATTCCACCCCACGAATCATTATAGAAACACCTGCTCTAGGGCCAGGATCATTTTCAGCACTGACTCCCTGGCTTTCAGGGCATGACATGAAAGATAGGATGGCAAAGTATGCAAGAACTGCAAACATATTTGCATTGGTAAGAGACCAGGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTAACTTACAGGCTCGACCAAGTGGACAAAGAAAATCTTAGAGTTGGACTAAGGAAAGCTTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTGGGCACATACAGGAGTGATGGCCAAAGAATCAAAAGTAGGGGGATCAAGGAGGAGGATTTGGAGGAGTTTCTTGACACTGTCACAATAGTTGGGGGTCCAAGTTCCAGGAATGAACTCTGGACAATATTTACCTCCGCACATCAGATGACAAgttgtagaatgggtgccactgaagaaaaaggagcccttgatgaaaatgCATTTTGTCCCGGCTATACCGGTATGAACCTTATAATAAAATGTTATCCTGTGTTTTTGTGGATTATACAACTTCTTAAGCTCTATAGAAATCACATGCACCATATTGGCAGAAAGCTCGAGAGTGATGGCTTGGCATTTCAATATCATGCCGGCTTGTATGGCTAA 1755 0.4171 MEGRESCHPLLKGGRRREKGYSHGLSTTQMHVMASICDTLFPSLPLNNQNSQHQPLSTFYNTSASQLPFPDETAELLFKRCLPEAVSLVSWVLWILSFRLGTLLLCGRLCLDWKWPFINKFSEISLDKREEILKKWSREKRWVPLRLVFVVIKLVFFYNFFSRADVNGYNPAWKAIGYQVDSKEKLKRKERPLQKGLIETTYETDSTLIQSLTEKGLEVSEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLANSGNGAVILTGCKAEKFILEDGKGGMKKKNCLGVIASATWRSKVTMKLQIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNLSGNNYEGGIITSIHKVFAEDSTPRIIIETPALGPGSFSALTPWLSGHDMKDRMAKYARTANIFALVRDQGSGEVKAEGRVTYRLDQVDKENLRVGLRKALRILVAAGAVEVGTYRSDGQRIKSRGIKEEDLEEFLDTVTIVGGPSSRNELWTIFTSAHQMTSCRMGATEEKGALDENAFCPGYTGMNLIIKCYPVFLWIIQLLKLYRNHMHHIGRKLESDGLAFQYHAGLYG 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02228 584 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 254 530 - -
Cca03g02228 584 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 4 255 - -
Cca03g02228 584 Pfam GMC oxidoreductase 202 338 IPR000172 GO:0016614|GO:0050660
Cca03g02228 584 Gene3D - 218 374 IPR036188 -
Cca03g02228 584 PIRSF Lg_Ch_AO 11 255 IPR012400 GO:0046577
Cca03g02228 584 PIRSF Lg_Ch_AO 253 532 IPR012400 GO:0046577
Cca03g02228 584 SUPERFAMILY FAD/NAD(P)-binding domain 228 417 IPR036188 -
Cca03g02228 584 Pfam GMC oxidoreductase 431 529 IPR007867 GO:0016614
Cca03g02228 584 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 254 530 - -
Cca03g02228 584 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 4 255 - -
Cca03g02228 584 SUPERFAMILY FAD/NAD(P)-binding domain 255 537 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02228 Cca-Chr3 43100523 43104354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02228 254 530 Acyl Lipid Metabolism Gene Families AT3G23410 60.071 1.57e-110 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02228 K17756 - fve:105349342 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02228 03 43100523 43104354 Cca03g02228 03 43100523 43104354 ECH