Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02227 ATGCAAGGCTTCTTCAAGTTGATTTCCTATTACCAAACACAGTCTGAACTCGCCTTCTGCGGCCTCACTACCTTGTCCATGGTTCTCAATGCCCTTGCCATTGATCCTGGTAGGAAATGGAAAGGGCCTTGGAGATGGTTTGATGAATCAATGTTGGGTTGTTGGGAACCTTTAGAGACGGCCAAAGTTAAAGGCATCAGTTTTAGAAAACTTGTGTGTTTGGCTCATTGTGCTGGGGCAAAAGTTGAAGCCTTTCGTGCAAGTAGTAGCACTATTGAAGAATTTCGTAAGTATGTCATTGAGTGTTCACGTTCTGAGGATTGTCATGTCATCGCATCATACCACAGAGCCGCTATCAAACAAaccggaggtggtcacttttctcctattggaggatatcaccctgaaaaggatatggtacttattttggatgttgcacgttttaAGTATCCTCCCCATTGGGTCCCACTTGAAGTTCTCTGGGAGGGCATGAATTATGTTGTTGACACTACTAGACTAACTAGGGGGTTCATGCTTATATCAAGGCCTCATAGGGAACTTTATACTCTGGAAGAGGTATTGAAACAGTTACAGGGGACTGAGCTTTTCAAATATGTAAATTCGTATTTGTCAAATTCTTACAACAGACAAACAACAGCTTCAGTTAATGGAAACACGTTACCTGCAAGTGTTTGTTGTCAAGGACCAAAAATTTTAGGTGGGAAACCAGACTCGTCAGTAGGTTATTGCTGCCGAGAAACACATATGAGAAGCTTAAAAGCTGAAGATGACAAGCCAATAACAACGGTTTCTGGGACTGTAGTAGATGGTAACTCCGAGCATGGGGTTGATGTGTTGATTTCTTCATCATCTGGGAAATTACGCTACAGTTGCTCTAATCCAAATAAGAACATTAGCATGCACCCTGCCGGCACTGATGTTCTAACCGTGCTTCTACTGTCCTTACCATCTACAACATGGGACGGCATCATAGATGAGCAACTTTTGGCCAAAATACGTGATCTGGTTCCAATTGATAATCTTCCTACTTTGCTTCAGGAAGAGGTTTTGCACTTGAGACGACAGTTACACCTTCTCAAGAGATGCCAAGAAGGTAAAGTGGATAAGGATCTTGGTTTATACCGCAGAGCACTCCCTTCTCCTGCAGTCGACTTTGCTTCCAAGGAGGGGAAGAACCTCTTCGCCGAAGCCCTTGCGCGAGGAACCCTCGAAGGCTTCTTCAAGTTGGTATCCTACTACCAGACGCAATCAGAGCCTGCCTACTGCGGCCTCGCCACTCTCTCCGTCGTCCTCAATGCCCTCGCCATCGACCCTGGACGCAAATGGAAAGGTCCTTGGAGATGGTTTGATGAGTCCATGTTGGATTGCTGCGAGCCTCTGACCAAGATTCAATCCCAAGGCATCACCTTTGGAAAAGTTGCGTGTTTGGCTCGATGCAATGGAGCTAAGGTGGAGGCCTTTCGATCTGATCAGAGCACCGTTGATGATTTTCGCCGCCGTGTCGTTTCGTGCTCTTCTTCTCAGGATTCTCACACCATTGTGTCTTACCACAGGACACCCCTCAATCAGactggaattggccatttttcgccggttggaggatatcatgctgagagggatatggtccttgtattggatgtcgctcgtttcaAGTATCCTCCACATTGGGTTCCCCTTACCCTTCTCTGGGAAGCCATGTGCACCATTGATCAAGCAACCGGACTTCGTAGGGGGTACATGGTTATTTCAAGGCTTAACAGAGCACCGTCTGTACTTTATACTGTGAGTTGTAGACATGAAGGTTGGAGCAGTGTTGCCAAATTTCTAACTGAAGATGTCCCTCAACTTCTAAAGTCAGAGGATCTAAAAGACATTCAGGAAGTACTCTCTGTTGTTTTTAAATCTCCTCCTAGTGAATTGAGAGGGTTAATCACATGGATTGCTGAAGTTCGCAGACAAGAAGACGGGAATCTTACATTGAGTGAGGAGGAGAAAGGAAGGCTTGCTATCAAGGCTGACATACTGGAACAAATTCGGACAACTGCACTCTTCAAACATGTGACCAGGTGGTTGGATTCTGGAAGTTCATGTTGTAATACTATTGCAAGACTTGGTGACAAAGATATGTTACCAGCACTTGCCGCCAGTGTTTGTTGTGAAGGGGCAGATCTTTTGACTGGTTGTGGTAGGCTAGGCTTGTCAGGTGGAAAATGCTTTAGTCAAATAGATGTAAAACATCTGAATGTTGGTGGTCAAAATCCAGTAACATTAGTTTCAGGAACTGTTACAACTGGTGGCAGTAGTGAACAAGGAGTTGATGTGTTGGTCCCTTTGTGTCATAGGGAGCCTAGTAGGCTATGTCTTTCTAAGGGAGGTCACTGCATTGGAATGCACCCGTCCACTGCAGATGTCTTAACGGTGCTTTTATTGGCCTTGCCCTTGCATACGTGGTCGGGCATTAAAGAAGAAAAACTGCGTGTGGAAGTTTTGAGCCTTTTAACAACTGAAGATCTCCCTCCCCTACTTCAGGAAGAGGTTTTGTTCCTGCGAGATCAACTCCATTTTCTCATGGCAGATATTAGAGCTCCTTCTCATTCATGA 2622 0.4245 MQGFFKLISYYQTQSELAFCGLTTLSMVLNALAIDPGRKWKGPWRWFDESMLGCWEPLETAKVKGISFRKLVCLAHCAGAKVEAFRASSSTIEEFRKYVIECSRSEDCHVIASYHRAAIKQTGGGHFSPIGGYHPEKDMVLILDVARFKYPPHWVPLEVLWEGMNYVVDTTRLTRGFMLISRPHRELYTLEEVLKQLQGTELFKYVNSYLSNSYNRQTTASVNGNTLPASVCCQGPKILGGKPDSSVGYCCRETHMRSLKAEDDKPITTVSGTVVDGNSEHGVDVLISSSSGKLRYSCSNPNKNISMHPAGTDVLTVLLLSLPSTTWDGIIDEQLLAKIRDLVPIDNLPTLLQEEVLHLRRQLHLLKRCQEGKVDKDLGLYRRALPSPAVDFASKEGKNLFAEALARGTLEGFFKLVSYYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPWRWFDESMLDCCEPLTKIQSQGITFGKVACLARCNGAKVEAFRSDQSTVDDFRRRVVSCSSSQDSHTIVSYHRTPLNQTGIGHFSPVGGYHAERDMVLVLDVARFKYPPHWVPLTLLWEAMCTIDQATGLRRGYMVISRLNRAPSVLYTVSCRHEGWSSVAKFLTEDVPQLLKSEDLKDIQEVLSVVFKSPPSELRGLITWIAEVRRQEDGNLTLSEEEKGRLAIKADILEQIRTTALFKHVTRWLDSGSSCCNTIARLGDKDMLPALAASVCCEGADLLTGCGRLGLSGGKCFSQIDVKHLNVGGQNPVTLVSGTVTTGGSSEQGVDVLVPLCHREPSRLCLSKGGHCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLRVEVLSLLTTEDLPPLLQEEVLFLRDQLHFLMADIRAPSHS 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02227 873 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 188 375 IPR040409 GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 185 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 188 375 - -
Cca03g02227 873 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 379 867 - -
Cca03g02227 873 SUPERFAMILY Cysteine proteinases 385 590 IPR038765 -
Cca03g02227 873 Pfam Domain of unknown function (DUF1984) 186 363 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 Pfam Domain of unknown function (DUF1984) 604 860 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 375 594 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 379 867 IPR040409 GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 191 IPR040409 GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 Gene3D - 389 594 IPR038156 -
Cca03g02227 873 Gene3D - 1 184 IPR038156 -
Cca03g02227 873 Pfam Phytochelatin synthase 381 586 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 Pfam Phytochelatin synthase 1 177 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Cca03g02227 873 SUPERFAMILY Cysteine proteinases 1 181 IPR038765 -
Cca03g02227 873 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02227 Cca-Chr3 43075813 43087354 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02227 K05941 - gmx:100782042 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02227 03 43075813 43087354 Cca03g02227 03 43075813 43087354 ECH