Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02188 ATGGCTATGGATTCGTCGAACGACGTGGCTTTGGGTTCCTCGGAGATGGAGAAGTTCCTCTGTGAGTTGTTGCTGGATTCCTCCCAGCCAATTTCTGAGCGTTTCAGAGCACTCTTCTCTCTCCGCAACCTCAAAGGCCCCGCCCCTCGCCACGCCCTTATTCTCGCAACAAGGGATTCGTCGAATTTGTTGGCGCATGAAGCTGCATTTGCGTTGGGTCAAATGCAGGAATTGGAAGCCGTCCCTGCTTTGGCCTCAGTTCTCAATGATCTTTCTTTGCATCCCATTGTTCGCCACGAGGCGGCCGAGGCACTGGGTGCTATTGGTTCAGATGGCAATGTTCCTCTCCTGAAGAGTAGTTTGGATTCGGATCCGGCGCAGGAGGTTCGAGAAACATGTGAGTTGGCTCTTCAACGGATTCAGCATTTAAAAGATGCTGGCAATACTGATGCATTGACTGCAACTGAAGTATCTCCTTTTAAGTCTGTTGATCCAGCTGCACCAGCGACTTCCTGTTCTTCTGTTGATCAATTAAGGAAAGTACTTCTTGATGAAGAAAAAGATATGTATGAACGCTATGCAGCTCTTTTTGCACTTCGAAATGACGGTGGAAATGAAGCTGTTGCTGCTATTATTGATTCCTTGGGCTCAAAAAGTGCTTTACTGCGCCATGAGGTTTGA 681 0.4816 MAMDSSNDVALGSSEMEKFLCELLLDSSQPISERFRALFSLRNLKGPAPRHALILATRDSSNLLAHEAAFALGQMQELEAVPALASVLNDLSLHPIVRHEAAEALGAIGSDGNVPLLKSSLDSDPAQEVRETCELALQRIQHLKDAGNTDALTATEVSPFKSVDPAAPATSCSSVDQLRKVLLDEEKDMYERYAALFALRNDGGNEAVAAIIDSLGSKSALLRHEV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02188 226 PANTHER DEOXYHYPUSINE HYDROXYLASE 21 226 - -
Cca03g02188 226 PANTHER PBS LYASE HEAT-LIKE PROTEIN 21 226 - -
Cca03g02188 226 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Cca03g02188 226 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Cca03g02188 226 SMART E-Z type HEAT repeats 189 218 IPR004155 -
Cca03g02188 226 SMART E-Z type HEAT repeats 95 124 IPR004155 -
Cca03g02188 226 SUPERFAMILY ARM repeat 14 223 IPR016024 -
Cca03g02188 226 Coils Coil 126 146 - -
Cca03g02188 226 Gene3D - 9 156 IPR011989 -
Cca03g02188 226 Pfam HEAT repeats 55 137 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02188 K06072 - gmx:100815364 370.548