Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02165 ATGCATTTTTCTTCCCAGGCTGCTGCTACAAGGTCATTAGCAAAGGGGACCAATCTTAATGCAATTCTTTCTATGTTGAAAGAGGTTGTTCCACAATTGTCATGTCCAATTGCACTGTTTACATATTACAATCCAATACTGAAGCGTGGTACTGAGAGATTTATGGCCACCATAAGAGACAGTGGCGTACATGGGCTTGTAGTCCCAGATGTCCCTCTGGAGGAGACAGAAACTTTAAGGACAGAAGCTAAGAAACATGGAATTGAACTGGTACTCCTCACAACACCAACAACTCCAACAGACCGAATGAAAGCCATCGTTGATGCAGCAGAAGGATTTGTGTATCTTGTGAGCTCAGTGGGGGTCACTGGTGCCCGAGCATCAGTTAGTGCTTCTGTTGAGTCTCTTCTGCGGGAAATTAAAGAGGCAACAACTAAACCTGTGGCAGTTGGCTTTGGAATATCCAAACCTGAGCATGTGAAACAGGTAGCAGGATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCTATGGTGAAGTTGCTTGGTGAAGCCAAATCTCCTCAAGAGGGGTTGAAAGAACTCGAAGATTTTACCCGCTCATTAAAGGCGGCACTTCCTTGA 621 0.4557 MHFSSQAAATRSLAKGTNLNAILSMLKEVVPQLSCPIALFTYYNPILKRGTERFMATIRDSGVHGLVVPDVPLEETETLRTEAKKHGIELVLLTTPTTPTDRMKAIVDAAEGFVYLVSSVGVTGARASVSASVESLLREIKEATTKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAKSPQEGLKELEDFTRSLKAALP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02165 206 CDD Tryptophan_synthase_alpha 6 202 IPR002028 GO:0004834|GO:0006568
Cca03g02165 206 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 6 205 IPR002028 GO:0004834|GO:0006568
Cca03g02165 206 TIGRFAM trpA: tryptophan synthase, alpha subunit 6 202 IPR002028 GO:0004834|GO:0006568
Cca03g02165 206 Gene3D Aldolase class I 4 206 IPR013785 -
Cca03g02165 206 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 6 205 - -
Cca03g02165 206 SUPERFAMILY Ribulose-phoshate binding barrel 6 185 IPR011060 -
Cca03g02165 206 Pfam Tryptophan synthase alpha chain 6 204 IPR002028 GO:0004834|GO:0006568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02165 K01695 - gmx:732610 354.369