Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02155 ATGGATTGGTTTTTAAAGATTTGCACCATTGTGATCTCTTTCCTTAGTTTCATAATTTGTCACGGTCATGCTCTCTCAATCAGTTTATACGACGTGGAATGTGTATCAGAGCACGTTCTACATGATGGTGACACTGTTTCTGGAAATTTTGTAGTTATTGATTATGATATTTTTTGGAGCTCAGACCATCCTGGAATTGATTTCACCGTGACATCTCCGGGAGGGAATTTAGTGTACTCTTTGAAGGGAACTTCAGGGGACAAATTTCAATTCAAAGCCTCACATCAAGGAATATATAGATTTTGCTTTCACAATCCTGCTTCAACGCCAGAGACAGTATCTTTCTACATTCACGTTGGCCACATCCCAAACGAACATGACTTAGCTAAAGATGAACATTTAGATCCCGTTAATGTGAAGATTGCAGAGTTGAGAGAAGCATTGGAATCTATTATATCAGAACAAAAGTACCTGAAGGCACGTGATATTAGACACCGACACACTAATGAAAGTACCAGAAAACGTGTTGTCTTCTACACAATATTGGAATATGTTTTGTTTGCTGTTACAAGTTTGTTGCAAGTGGTATACATTCGACGCCTCTTTAGCAAATCATTTGCTTATAACCGAGTGTAG 636 0.3821 MDWFLKICTIVISFLSFIICHGHALSISLYDVECVSEHVLHDGDTVSGNFVVIDYDIFWSSDHPGIDFTVTSPGGNLVYSLKGTSGDKFQFKASHQGIYRFCFHNPASTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESIISEQKYLKARDIRHRHTNESTRKRVVFYTILEYVLFAVTSLLQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02155 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Cca03g02155 211 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 4 207 - -
Cca03g02155 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 40 128 IPR036598 -
Cca03g02155 211 Pfam emp24/gp25L/p24 family/GOLD 32 202 IPR009038 -
Cca03g02155 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 207 IPR015720 -
Cca03g02155 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02155 Cca-Chr3 42124716 42126411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02155 K20347 - gmx:100789501 397.127