Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02118 ATGAGTTCTGTTATCTCTTCTCGCCTATCGTTGCTTCTCAATTTGGAGGACAATGGTATTTACGTGTATGAGAGACGAACCGGAGTGCCCTTCCCTTCTGCTCTAGGCCCTTCTCTTAAACTCTGTGGAGTTGGTTTGCGCCAAAAAAGCCTTATTCCATTCATAAGCTTTGATGTTTATGCATTTGGTGTTTATGCTGCTGATTTGGATATAAAGAAATATCTTTCTGAGAAATATAGAAAGTTTTCTGCTTCCAAGTTGCAGGGCAAGAAGGAGTTTACTGATGATCTTATGGAAAGTGATATATTCATGGCAGTTAGACTTCAAATTGTCCGCAGGGATTTGAGCATTCGTTTCTTGCGTAGTGTATTTGAAGAGTCCGTGGGAAGCACACTACACAAGTCTGGGGAATCGGACTATAAAGAATTGCTTCAAAGGTTCACTTCACAGTTTAAAGATGAATACAAAATACCTCATGGATCTGTAATTCATCTTTTAAGAGAGAAGGGTCATGTTCTACGTATGTTGATTAATGGACAAGAAGTGGGAAGCATACAGAGTAAACTCTTATGTAAGTCAATTCTAGCTTTATATGTTGGGGAGGAAGTATTTGATGAACCAGCCAAAGAGGAAATTGAGAACAATGTGGCTACTTACCTCTAG 663 0.3922 MSSVISSRLSLLLNLEDNGIYVYERRTGVPFPSALGPSLKLCGVGLRQKSLIPFISFDVYAFGVYAADLDIKKYLSEKYRKFSASKLQGKKEFTDDLMESDIFMAVRLQIVRRDLSIRFLRSVFEESVGSTLHKSGESDYKELLQRFTSQFKDEYKIPHGSVIHLLREKGHVLRMLINGQEVGSIQSKLLCKSILALYVGEEVFDEPAKEEIENNVATYL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02118 220 SUPERFAMILY Chalcone isomerase 24 219 IPR036298 GO:0016872
Cca03g02118 220 Pfam Chalcone isomerase like 39 212 IPR016087 GO:0016872
Cca03g02118 220 PANTHER FATTY-ACID-BINDING PROTEIN 1 8 219 - -
Cca03g02118 220 Gene3D - 24 198 IPR016088 -
Cca03g02118 220 PANTHER FATTY-ACID-BINDING PROTEIN 1 8 219 IPR044228 -
Cca03g02118 220 Gene3D - 70 213 IPR016089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02118 Cca-Chr3 41588163 41589919 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02118 - - ccaj:109789102 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02118 03 41588163 41589919 Cca03g02118 03 41588163 41589919 ECH