Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02110 ATGGGGAGTCTTGCTCTTGAAACTGAGGATGTGAGCTCAGATATATACCTTTCCCTGGGGCTTAAGGAATCAGATAAAGGTGTTGGAGTTCCTCGAGTTTTGACACTCCTCTCTTCACTTCTCGAGAGATTAGTTCAGAGAAATGAAACGCTATTGGAGGCAAAGCACATGGAAGATGTTCTTACAGTATTTCACGGTTTAAGAGCTCCTACCTTGAGTGTTCGAAAGTATATTGATCGTATCTTCAAGTACTCAGGTTGTAGCCCTTCCTGCTTTGTTGTGGCACACATATATGTGGATAGATATATTCAGCACACAGAAATCAATTTGACTTCACTCAATGTTCACCGGCTTCTGATAACAAGCATTATGCTAGCAGCAAAGTTTATGGATGACGCATTCTACAACAATGCTTACTATGCAAAAGTTGGAGGAGTAAGCACATCTGAATTAAACAGGTTGGAGATGAGCTTTCTGTTTGGTATAGATTTTAGACTTCAGGTTAGTATAGACACGTTTGGAAGATATTGTAGGCAATTGGAGAAGGAAGCCACGGAAGCAGTCCAAATCGAAAGGCCAATGCAGGCGTGTCGAATTAAAGAAAGTTGGTCAAACAAAGATGATCCTACATGTGCTTCCACAATTGCAAGATGA 654 0.4098 MGSLALETEDVSSDIYLSLGLKESDKGVGVPRVLTLLSSLLERLVQRNETLLEAKHMEDVLTVFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRYIQHTEINLTSLNVHRLLITSIMLAAKFMDDAFYNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQVSIDTFGRYCRQLEKEATEAVQIERPMQACRIKESWSNKDDPTCASTIAR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02110 217 CDD CYCLIN 76 159 IPR013763 -
Cca03g02110 217 PANTHER CYCLIN 12 204 - -
Cca03g02110 217 Pfam Cyclin 61 166 IPR013922 GO:0000079|GO:0019901
Cca03g02110 217 PANTHER UNCHARACTERIZED 12 204 IPR013922 GO:0000079|GO:0019901
Cca03g02110 217 Gene3D - 23 214 - -
Cca03g02110 217 SUPERFAMILY Cyclin-like 76 166 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02110 Cca-Chr3 41440107 41442601 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02110 - - gmx:100805926 401.364