Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02099 ATGAATGTTTGGTTCCAACCCAACGAGATGAGCAAGGCCGCAACTTCTCCCAAGGATTCTGGCGACAACACGGTCACCCACTTTCATTTTTTCAACAAATTTAAACGCTTTTCCCCTCTCGAATCTTCCTTCGGAGTACTCGCCTTCTTCTTCGTCGCTATTCTCTTCCTTGCGTGCTTCTTCTACTTGGATTTCAACGGCTTACGCTCTCGTGCCACCACCACTATCCTTGACTTGGGTTTTTCATCTTcttctgcttcttcttctgcttctgcttctgcttcggtttctgtttctgtttctacttctgcCCCGGTTCAGTTTCTGAGCCACGATGGCGACAACTGTGATGTCTTTGATGGGAATTGGGTTTGGGATGAGACCTATCCCCTTTACCGTTCCGCCAATTGTTCCTTCTTGGATCAAGGTTTTCGCTGCTCCGAGAATGGGAGACCTGACACCTTCTACACCAAGTGGCGATGGCAGCCCAAAGATTGCAACTTGCCCAGATTTGATGCAAGGAGGATGTTGGAAAAGCTACGGGACAAGCGATTAGTTTTTGTTGGTGATTCGATTGGAAGAAACCAATGGGAATCACTCCTTTGCATGCTCTCTTCTGCAATTGCTGACAAGACTCGTGTATATGAGGTTAATGGGAGCCCAATTACAAAGCACACAGGCTTCTTGGCATTCAAGTTTGAAGATTTCAACTGCACCATTGAATACTATAGATCACCGTATCTTGTAGTACAGGGACGGCCACCTTCTGGAGCACCGGATGGGGTGAGAATGACTTTGAGAGTGGATCATATGGACTGGATTTCTCATAAGTGGAGAGATGCAGACGTGCTGGTTCTCAATGCTGGACATTGGTGGAATAATGAGAAGACCGTTAAAATGGGTTGTTACTTCCAAGTAGGGGAGGAAGTGAAGATGAATATGACTACGGAAGACGCATTCAGAAAATCAATGGAAACAGTAGTTGGTTGGATTGCCAATGAAGTAAACCTAAACAAAACTTATGTCCTTTTCCGAACTTATGCTCCTGTTCATTTCAGGTTTGTGTAA 1068 0.4279 MNVWFQPNEMSKAATSPKDSGDNTVTHFHFFNKFKRFSPLESSFGVLAFFFVAILFLACFFYLDFNGLRSRATTTILDLGFSSSSASSSASASASVSVSVSTSAPVQFLSHDGDNCDVFDGNWVWDETYPLYRSANCSFLDQGFRCSENGRPDTFYTKWRWQPKDCNLPRFDARRMLEKLRDKRLVFVGDSIGRNQWESLLCMLSSAIADKTRVYEVNGSPITKHTGFLAFKFEDFNCTIEYYRSPYLVVQGRPPSGAPDGVRMTLRVDHMDWISHKWRDADVLVLNAGHWWNNEKTVKMGCYFQVGEEVKMNMTTEDAFRKSMETVVGWIANEVNLNKTYVLFRTYAPVHFRFV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02099 355 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 168 353 IPR026057 GO:0016740
Cca03g02099 355 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 32 353 IPR029962 GO:0016413
Cca03g02099 355 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 32 353 - -
Cca03g02099 355 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g02099 355 Pfam PMR5 N terminal Domain 115 167 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02099 Cca-Chr3 41287713 41291791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02099 - - gmx:100779356 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02099 03 41287713 41291791 Cca03g02099 03 41287713 41291791 ECH