Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02077 ATGGAGAGAGAAGTGAGAGGGATACAGTTACCGTTAAGCCAAACTCAGAAGGTTCGTCTTCAGAAGGCTCTAGAACAGTTACAGTCTCTGTCATTGAAGGTGAATTTCGATGCTTCGGTGGTCGTCGCCGATTCCATCTCCGTCAACCACGAAGACGGCGTTCTCAAGGGGCACGGAACCGCCGACCTCAACGGCGAAGTCGTCGCCACCGTCTGCGGCGTCGTTGAGCGTGTCAACAAACTTGTCTACGTCCGTGCCTTACGCTCCCGGTATAAACCTGAGGTCGGTGACATCGTTATAGGGCGTGTTGTTGAGGTTGCTCAGAAGCGTTGGAGATTGGAGATAAATTACAGTCAGGATGCAGTTTTGATGCTTTCTTCTATGAATATGCCTGATGGTGTCCAGAGGCGGAGGACCGCTGTGGACGAGCTAAACATGCGCTGCATTTTTGAGGAGAATGATGTTGTTTGTGCTGAAGTTCGTGGTTTCCAGCATGATGGCTTACACCTTCAAGCAAGGAGTCGGAAGTATGGAAAGCTTACTAGAGGTCAACTGCTTAGAGTCTCACCTTATTTAGTGAAGAGACAAAAACAACATTTCCATCATCTGGAGGAATTTGGTATTGATTTGATACTTGGCTGTAATGGGTTCATATGGGTTGGGGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAAGTGAACCAATCTGATCCACAAGTTCTATTGCCTAGTAAAAATAGTGTGAGTCTTGAAGAACAAGAGAAAAGTTATACAACATTGGAGACAAGAAAATACATATGCAGAGCTGCTAATGCTATTAGAGTATTATCAACCTTAGGCTTCAATATTACATTGGAAATCATCAAGGGAATTATTGATCTAAGCCTATCTTTGAATCTTGATATACATGATATGCTTGGTTCTGAGTTTTGTGTTCTGGTTGCCGAAAAAGAGGCAGAAAGGAGAAGCTCAAATAAAAAGAAGCGGTAG 996 0.4408 MEREVRGIQLPLSQTQKVRLQKALEQLQSLSLKVNFDASVVVADSISVNHEDGVLKGHGTADLNGEVVATVCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYSQDAVLMLSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLTRGQLLRVSPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHIEAKDDMVEDQVNQSDPQVLLPSKNSVSLEEQEKSYTTLETRKYICRAANAIRVLSTLGFNITLEIIKGIIDLSLSLNLDIHDMLGSEFCVLVAEKEAERRSSNKKKR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02077 331 Gene3D - 92 181 IPR012340 -
Cca03g02077 331 SUPERFAMILY Nucleic acid-binding proteins 89 180 IPR012340 -
Cca03g02077 331 PANTHER EXOSOME COMPLEX COMPONENT RRP4 14 326 - -
Cca03g02077 331 Gene3D - 40 91 - -
Cca03g02077 331 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 183 326 IPR036612 GO:0003723
Cca03g02077 331 PANTHER PNAS-3 RELATED 14 326 IPR026699 GO:0000178|GO:0003723
Cca03g02077 331 SUPERFAMILY Ribosomal L27 protein-like 48 86 - -
Cca03g02077 331 CDD S1_Rrp4 90 180 - -
Cca03g02077 331 Pfam KH domain 183 223 IPR004088 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02077 K03679 - gmx:100776358 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02077 03 41031295 41033464 Cca03g02077 03 41031295 41033464 ECH