Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02074 ATGATGACAGGCGAGGAACTGATACAAAAGCTTGAAGACTTAACCAAGAACGCCCAACATCACCAGTTGGAGACTCTCCGTTCGATCCTTCTTCACAATGGCAACGTACGCTATCTCCAACCCTTCAAGGCTCCTCTTCATCCCTCCACTTTCACACGTCTCGTGCCCTTGTCTTCCTATCAAGACTACGTTGACTTCATCAACCTCATGGCAGAAGGGAAAGATGACCCTTTTCTCTCCGTTGACCCTCTCTTATGCTTCTTCTACAGCTCAGGAACAAGTTCAAGCACCATGAAACCGAAATTGATCCCTTACTTTGATTCAAGCCTTTCCAAAGCAGCTTCCTTTATTGGTCATCGAGGCAGTGTTGCTATTCGTCAAAGGCTATTTCCTCCAAGGCCAGAAGTGAACAAGATCCTATGGTTTCTCTATGCTGACAATATTACTACTACTAAATGTGGCTTGAAAGTTATGGCTGCCTCCACATACCCTTTGCAAAGTGGTAATGCCACCCCTCAACAACTTGCTACCTTTTCCAGTCCCCTAGAAGTGATTCTTGGGTCTCATGTTGAGCATCAATTGTACTGCCACCTTCTATGTGGCCTTAGGAATCTTGAACTTATAGATGGAATCACAACCCCTTATGCCATTGGCTTGATCAAAGCATTTGGTTTTCTGGAGTCCAAGTGGGAGCAACTATGTGATGATCTAGACCATGGATTTCCATGTAATGAAATTTCAGAGGTGGCAATGAGGGAAGCTGTAACTAAGACTCTTGGTGGACCTCAGCCAGAATTGGCAAAGAGAATAAGGTTAATCTGTGAAGGTAACAACTGGGGTGGAATTGTGTATAGATTGTGGCCAAACATTCGTTACATAAGGTGTGTTACCACTGGAAGCATGAAGCAGTACTACCAAAAACTCAAGTATTATGCAGGAGAGGTACCTATTTTAGGAGGGGATTACTTTGCTTCAGAGTGTTGTGTGGGTATAAATTTAGACATAATGCAACCTCCTGAGACAACACGGTTTGTGATGCTTCCAACTGCTGCCTACTTTGAGTTTCTTCCATTTAAGATGAATGAGGACAATATTGTTAATAAGGAAACAGTGGATCTTAGTAGTGTGGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTTATAGAGGATTTTATCGCTACCGTTTGGGCGATATAGTGAGAGTTGTTGGTTTCCATAACTCATCTCCACAAGTAGAGTACGTAATGAGAGCACCTAAAACTCCTGCTGAGATTGTGACTGAGAAAGACTTGATTTCGGCTGTTGAAAATTTTCAACTTGCACTTAGAGGTGCTATGAGAATTGAGATTGTCGAGTTTGCAAGTTTCTTGGACCAGGAGTCAAGACCTAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCTAACTTTTTGGAGGATAAACTGGAGGAATCAGTAAAAAAATTTAGAAGTTGTATCTCCTCTCTCGAGAGTGGCTTGGGAGCTATGTACAAGGTGCAAAGGGATAAAGGTCAACTAGGAAACTTAGTGATATTCATCATAAGGCCTGGAGCTTTTGATCAATTATCAGAATTAGCCATTAAGAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATTATACGGAATCATGAAGTTGTCAAATTATTGGAAAATTTAGCCTTTGTGACAGCTTCACTGGATGACTAA 1719 0.4188 MMTGEELIQKLEDLTKNAQHHQLETLRSILLHNGNVRYLQPFKAPLHPSTFTRLVPLSSYQDYVDFINLMAEGKDDPFLSVDPLLCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHRGSVAIRQRLFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLATFSSPLEVILGSHVEHQLYCHLLCGLRNLELIDGITTPYAIGLIKAFGFLESKWEQLCDDLDHGFPCNEISEVAMREAVTKTLGGPQPELAKRIRLICEGNNWGGIVYRLWPNIRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGINLDIMQPPETTRFVMLPTAAYFEFLPFKMNEDNIVNKETVDLSSVEVGKMYEVVVTTYRGFYRYRLGDIVRVVGFHNSSPQVEYVMRAPKTPAEIVTEKDLISAVENFQLALRGAMRIEIVEFASFLDQESRPKQLKVFVEVQEESNFLEDKLEESVKKFRSCISSLESGLGAMYKVQRDKGQLGNLVIFIIRPGAFDQLSELAIKNGTSASQYKPPKIIRNHEVVKLLENLAFVTASLDD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02074 572 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 565 - -
Cca03g02074 572 Pfam GH3 auxin-responsive promoter 10 554 IPR004993 -
Cca03g02074 572 Coils Coil 4 24 - -
Cca03g02074 572 Coils Coil 470 490 - -
Cca03g02074 572 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 565 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02074 Cca-Chr3 41013874 41016845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02074 8 561 EF-hand Containing Proteins AT1G23160 32.746 6.18e-96 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02074 K14487 - gmx:100786829 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02074 03 41013874 41016845 Cca03g02074 03 41013874 41016845 ECH