Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02058 ATGAGCAAAAGTTACAGAACGAAAACACGAATGATGTCAATTTTGCACATCACCCTCACCCTCACCCTCTTATTCTCCTTACTCGCAAATGCAGAAGCCGCTGATGAATTCTATCGAGACATATCTCCAACATCTCTGGGTCTCCACAAGGAAAAGCTCACCCACCTTCGCTTCTACTTGCACGACATTCTGAGCGGCTCAAAGCCCACCGCGGTCAGGATCGCCCAGGCCCAGTCCACCAACACTTCCTCCTCGCTTTTCGGGCTCCTCGTCATGACCGACGACCCGTTGACCGTGGGGCCCGAGCCTGACTCCAAACTGGTGGGAAAGGCCCAAGGAATGTATGGGTTTTCAGACCAGAAGGAGATTGGGCTTTCGGTAATCTTCAACATGGCTTTCACCGAGGAGAAATACAATGGCAGTACCATCAGCTTGCTGGGGCGGAACATGGTGCTCTCCGCCGTCAGGGAAATACCGATTGTCGGCGGCAGCGGAGCTTTCCGTTTCGCACGTGGCTATGCCGAGGCCAGGTCTTACACTCTTGATGGCCAGACAGGGGATGCCGTTGTTGAGTACAACCTTTACGTCTTCCATTATTAG 600 0.53 MSKSYRTKTRMMSILHITLTLTLLFSLLANAEAADEFYRDISPTSLGLHKEKLTHLRFYLHDILSGSKPTAVRIAQAQSTNTSSSLFGLLVMTDDPLTVGPEPDSKLVGKAQGMYGFSDQKEIGLSVIFNMAFTEEKYNGSTISLLGRNMVLSAVREIPIVGGSGAFRFARGYAEARSYTLDGQTGDAVVEYNLYVFHY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02058 199 Pfam Dirigent-like protein 54 197 IPR004265 -
Cca03g02058 199 PANTHER NUCLEOPORIN-RELATED 17 198 IPR004265 -
Cca03g02058 199 Gene3D - 43 194 IPR044859 -
Cca03g02058 199 PANTHER DIRIGENT PROTEIN 17 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02058 Cca-Chr3 40834398 40835080 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02058 - - gmx:100789492 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02058 03 40834398 40835080 Cca03g02058 03 40834398 40835080 ECH