Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02056 ATGGGAAAATCTAAAAGCCTCCCAACTATTTTCACCATAATTATTATCACGCTCCTCTTCTCATTCGCCACCGCAAAATCCCCTCGTTTCCACCGATCCATATCTCCAACATCTCTGGGCCTCCAAAAGGAGAAGCTTAGCCACCTTCACTTCTACTTCCACGACATTGTTAGCGGCCCAAAGCCCACCACCGTTAGAGTGGCCGAGGCCCATATGACAAACACTTCCTCCACGCTTTTCGGTCTCCTGGTCATGGCCGATGACCCATTGACCTTGGGCCCCGAGCCAGGATCCAAGCTCGTGGGAAGGGCCCAAGGAATATACGGATCTGCTGCCCAAGACGAAACGGGCCTGTTGGTGATCATGAATTTGGCGTTCACGGAGGGAAAGTATAATGGCAGCACACTGAGCATGTTAGGGCGGAACACGGTGTTCTCCGCCGTGAGAGAAATGCCAATAGTTGGAGGAAGCGGGGCTTTCCGGTTCGCACGTGGGTATGCTGAGGCCAAGACTCACACGTTTGATCTCAAGACAGGGGATGCTGTTGTCGAGTACAACGTCTACGTGTTCCATTATTAG 579 0.5216 MGKSKSLPTIFTIIIITLLFSFATAKSPRFHRSISPTSLGLQKEKLSHLHFYFHDIVSGPKPTTVRVAEAHMTNTSSTLFGLLVMADDPLTLGPEPGSKLVGRAQGIYGSAAQDETGLLVIMNLAFTEGKYNGSTLSMLGRNTVFSAVREMPIVGGSGAFRFARGYAEAKTHTFDLKTGDAVVEYNVYVFHY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02056 192 Pfam Dirigent-like protein 47 190 IPR004265 -
Cca03g02056 192 Gene3D - 35 188 IPR044859 -
Cca03g02056 192 PANTHER NUCLEOPORIN-RELATED 6 191 IPR004265 -
Cca03g02056 192 PANTHER DIRIGENT PROTEIN 6 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02056 Cca-Chr3 40823650 40824228 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02056 - - gmx:100816095 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02056 03 40823650 40824228 Cca03g02056 03 40823650 40824228 ECH