Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02054 ATGGCAAAATCCAAAAGCCTCACATTTGTTTTCACCATCATTCTCACGCTTCTCTTCTCATTGGCCACCGCAAAATCCCCTCCTTTCTACCGAACCATATCTCCAACATCTCTGGGCCTCCACAAGGAGAAACTAAGCCACCTTCATTTCTACTTCCACGACATTGTCAGCGGCCCAAAGCCCACGGCCGTCAGAGTGGCCGAGGCCCGCATCACCAACACTTCCTCCACGCTTTTCGGTGTCGTAGTCATGGCCGACGACCCATTGACCGTGGGCCCCGAGCCAGGATCCAAAGTCGTGGGAAGGGCCCAAGGAATATACGGATCTGCAGCCCAAGACGAAACGGGCCTGTTGATGATAATGAATTTGGCATTCACGGAGGGAAAGTATAATGGCAGCACACTGAGCATGTTAGGGCGGAACACGGTGTTCTCCGCCGTGAGAGAAATGCCAATAGTTGGAGGAAGCGGGGCTTTCCGGTTCGCACGTGGGTATGCTGAGGCCAAAACTCACACGTTTGATATCAAGACAGGGGATGCTGTTGTCGAGTACAACGTCTACGTGTTCCATTATTAA 576 0.5226 MAKSKSLTFVFTIILTLLFSLATAKSPPFYRTISPTSLGLHKEKLSHLHFYFHDIVSGPKPTAVRVAEARITNTSSTLFGVVVMADDPLTVGPEPGSKVVGRAQGIYGSAAQDETGLLMIMNLAFTEGKYNGSTLSMLGRNTVFSAVREMPIVGGSGAFRFARGYAEAKTHTFDIKTGDAVVEYNVYVFHY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02054 191 Pfam Dirigent-like protein 46 189 IPR004265 -
Cca03g02054 191 PANTHER NUCLEOPORIN-RELATED 7 190 IPR004265 -
Cca03g02054 191 PANTHER DIRIGENT PROTEIN 7 190 - -
Cca03g02054 191 Gene3D - 34 187 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02054 Cca-Chr3 40810885 40811904 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02054 - - gmx:100816095 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02054 03 40810885 40811904 Cca03g02054 03 40810885 40811904 ECH