Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02052 ATGTCTGGAAAAGCATCAACTTCAAAGCCTAGTATAGGTCTGGGTGGATCTGATGGTCTTTCTCATGCTTACATTCAGTATCCACCACTTCGGTGCAATGTTCCTGGATCAAGTGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCTCCAACAGCTGACCAGGTCTTCTCATGGAAAGTTGGTCCCTTTGATCCTCTCATTGATCCAGACACTGATTCAATAAGTGAAGGCCCTATTATAGCTATTCGGTATTCTTTAGACACAAAAGTTATTGCAATCCAACGATCAAACCATGAGGTACAGTTTTGGGATAGAGAGACTGGGGGGACTTTTATCCATAAGTGCAGGCCAGAATCAGAAACTATACTTGGATTTTTTTGGACAGATTGTCAACAGTGTGATTTTGTTCTTGTTAAGACCAGTGGTCTAGACTTGTTGGCATATAATTCAGAGTCAAAATCACTGCAACTGATGCAAACGAAGAAACTGAATGTGAGTTGGTTTGTTTACACCCATGAAAGTCGCTTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCATGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGACGTCTTTATTGTCACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTCCATTCTTATAGGCTTTATCGTGATGCAGTGATACAGCAGGGTTCTTTACCAATTTATTCCAACAGGATTGCTGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGAAGCAAAGGTTGTTATACTTTATGATCTCTTTGTAGATTCTCGAGCACCAATATCTGCACCACTTCCTTTATTATTAAGGGGTTTCCCCAGATCCAGTACTTTATCTCAATCTAGTGGTAAAGAAAGTGAGAGTTCAGGTGGTAATGTTTTGAGTAATCATGAAGCAGTTACATATGCCAATACATGGACTTTCCTAGTGCCTGACCTTGTATGTGATGTGGCCAATAAGTTATTGTGGAAGTTCAATTTAGATTTGGAGGCAATTTCTGCTAGTAGCTCAGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAACACGTACACTTATTCTAGAGCATAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCGTACTCTCATTCAATTAAAACTGGTAGCTATCTTAAGGGACTGAAACCAGAGAAGACATCAACTTCTGTTGTACAAAATACTGGTGCTGATGTATCTGCTATCGAAACAGATGTAATTGGAAAATCGATCTTACATGAATCTACTGAAAGAGTAGACAGTGGATCTTATAATAAAGCTTCTACTGTTTCAAGTATTGATTCTGAGGATGAGTCCCAGACTGCAAATTTAAAACTAAATTTGAAGGAAGCCCAAGTTGAGGGTAAAGTGAACAATGAAATCTCTCTGGGCACTGGAGCTCATGGTGCGTATGTTATGCAGTCATCTTTGCAATCTGGGCAAGAGGAATCCCAACTTGCTTCTGCAGCAATTTCACCAGATGAGATTTACAGCTTTGTCTTTTCTCCTGTCGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAAAAGATTCGTGTACTCCCAAATGTATATGTATTAATAATTCAACTTCTGGCCCGCAACGAACGTTATGCAGAACTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGCCCTCTAAGGAAGTTGCACTGCAACTCCTAGAGTCTGGTCGTCAGGATGCTCAAACTAGGAAGCTTGGTCTGGATATGTTAAGACAGCTGGGTTTGCATCATGATTATGTTTTACTGCTCGTACAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACAAGGTGGATACCATCCGGTCATCATTGTTCTTGGAAGCAGCATTTGTGTCCAATGACTCCCAACATCTTGCTGCGGTTTTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGAGCATAATAGATACTGCCGCATACTGAATGAAATGAACTCATCCATGACTGTTTGA 2220 0.4086 MSGKASTSKPSIGLGGSDGLSHAYIQYPPLRCNVPGSSGLFYDDGNKLLLSPTADQVFSWKVGPFDPLIDPDTDSISEGPIIAIRYSLDTKVIAIQRSNHEVQFWDRETGGTFIHKCRPESETILGFFWTDCQQCDFVLVKTSGLDLLAYNSESKSLQLMQTKKLNVSWFVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSNRIAVSVVDNVLLIHQVEAKVVILYDLFVDSRAPISAPLPLLLRGFPRSSTLSQSSGKESESSGGNVLSNHEAVTYANTWTFLVPDLVCDVANKLLWKFNLDLEAISASSSEVPSVLEFLQRRKLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVTSYSHSIKTGSYLKGLKPEKTSTSVVQNTGADVSAIETDVIGKSILHESTERVDSGSYNKASTVSSIDSEDESQTANLKLNLKEAQVEGKVNNEISLGTGAHGAYVMQSSLQSGQEESQLASAAISPDEIYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRVLPNVYVLIIQLLARNERYAELGLFVLNKILEPSKEVALQLLESGRQDAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYKVDTIRSSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSEHNRYCRILNEMNSSMTV 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02052 739 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 15 735 IPR040371 GO:0010506|GO:0035658
Cca03g02052 739 Pfam Colon cancer-associated protein Mic1-like 572 712 IPR009755 -
Cca03g02052 739 SUPERFAMILY WD40 repeat-like 39 178 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02052 K24763 - gmx:100500389 1312.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02052 03 40750653 40762232 Cca03g02052 03 40750653 40762232 ECH