Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02048 ATGCCAGGAATAGCGCAAAGGAATGAACAACTCACTAATGGCTCGGCGGTGTCTACGACGTGTTCAGTTTCTGCAAATGGATTTTGGTCGAAGAATTCCGATGATGTTAGCTACAATCAGCTTCAGAAGTTCTGGAGTGAGCTGTCGCTGCAAGCTCGGCAAAAACTCTTGAGGATAGACAAGCAATCCCTTTTTGAGCAAGCTCGTAAAAATTTGTACTGCTCCAGGTGCAATGGGTTGCTTCTTGAAGGTTTTCTGCAGATTGCAATGTACGGAAAATCTTTGCAAAAGGAAGGGGTGGATGCTCACTTTCCTTGCAACAGATCCGGAGGCTTGAGAAAGCTAAATAATGATGGATCAAGCATTATCAATGGATGCCAAGATGAAATTCATGACCCATCTATCCATCCTTGGGGAGGTCTGACTACAGCACGTGATGGTTCGTTAACACTTATGACCTGCTACCTGTATTCAAAGTCTCTGAAAGGACTGCAAATTGTCTTTGATGGGGCACGTGCCAGGGAGCGGGAAAGAGAACTGCTTTATCCTGATGCTTGTGGTGGGGGAGGCCGTGGTTGGATAAGCCAAGGAATAGTGAGTTATGGAAGAGGACATGGGACAAGAGAAACATGTGCCCTGCATACTGCCAGACTTTCATGTGATACACTAGTTGATTTTTGGTCAGCACTGGGAGAGGAGACTCGGCTTTCTCTTCTAAGGATGAAGGAAGAAGATTTTATTGAGAGGCTTATGTACAGGTTTGATAGCAAGAGATTTTGCAGAGATTGTAGAAGAAATGTTATTCGAGAATTCAAGGAACTAAAAGAACTGAAGCGCATGCGTAGAGAACCTCGTTGCACCAGCTGGTTTTGTGTTGCTGACTCCGCCTTTCAATATGAGGTATCTGATGACTCAGTTCAAGCTGATTGGCGTCAGACATTTGCTGATGCATCGGGAACCTATCATCACTTTGAGTGGGCCGTGGGGACAACTGAAGGAAAATCTGACATTTTGGAATTTGAAAATGTTGGATTAAATGGATGTGTTCGAGCCAGTGGCCTGGATCTTGGTGGTTTGACTGCATGTTTCATCACTCTGCGAGCTTGGAGATTAGATGGACGCTGTTCTGAACTTTCTGTTAAAGCTCATTCGTTGAAGGGTCAACAGTGTGTACATTGCAGGTTAATTGTAGGAGATGGTTATGTTACAATCACAAAGGGGGAAAATATCAGAAGATTCTTTGAGCATGCTGAAGAGGCCGAGGAAGAAGAGGATGATGATTCAATTGACAAGGATGGCAACGAGCTTGATGGAGAATGCTCTCGTCCCCAAAAGCATGCAAAAAGTCCTGAACTTGCTCGAGAATTTCTGCTAGATGCTGCCACTGTTATTTTCAAAGAACAGGTTGAAAAGGCCTTCAGAGAAGGAACAGCACGCCAAAATGCACACAGCATATTCGTCTGCCTTGCACTAAAACTGCTGGAGGATCGAGTGCATGTAGCATGCAAAGAAATCATTACACTGGAAAAGCAGATGAAACTTCTTgaagaagaagaaaaggaaaaacgtgaagaagaagaacgcaaggagaggagaaggacaaaggaaagggagaaaaagcttaggaggaaggaaagactaaaaggaaaagaaaaagaaaaaAGGTGTTCTGAATTAAGTGATGCTCTTGGGTCTCCTGAAATCTCAAAGGAAAAATTGTCTGCAGTTGCCGATTTGGAGGAAAATAATCCTATTAGCTGTAGCAATTCGGTTATTGAAACAGATGAAACCAATCTATTGAGGGAAGATTCTCCTAACATCCAAGATGAAGAATTCTCTAGTGAGTGTAGTACTTTGAAACCACAAGACCTATCTTATGATGATTGTGAGGAAGAAATTTCAAATGCAAAAGCCGAGATAGGACAGTGTACAATTGAACAATCAATGCCTTCTCATCGAAGACTAAGATGCAGGAAAGAATTTCAACTGGATGTGCCTATGAAGTGGTCTGATAGACGGCGATATGCAGTTGTTTCAGAAAATAGTGCAATGGTTGGCAGATCTGAGCCAAGACAGTATGGAGAGAGTTTTGTGGCATCATCCAGGGCAATGAATGGGTTCAATAGGCAATCAAGAATAAATGTCCCAACAAAGTCCAATGGTCGAAATGTTGGTCCTCCCAAGTATAATGAGAAGTTCTATAGCTCAAAGAACCGGACAAATGATAGATGTGATATTCATTCGTGCAGTTGTAGCTTGAACAATGAGTATAAGACAAGGATTGAGCAGCATTCTCCTATGACTAGAGTTAGCTGGGAGACAAAACCTACCAGTCAGTTTGAATCTGCAGGAGATACATCCAAGCAATTTTATCGTGGTAGTAAGAATAATCAAGTAGACTATGTGCATGAGAGTAATGGAAGACCCAAAAGCAAAATCATCTTGGGGAACTATACGAGCAGGGATTTGTTTCAATCGAAGAAAGTTTGGGAACCTACAGAATCTCAGAAGAAATATCCTCGCAGTAATTCTGACTCTGATGTTATTTTGAGGTCTACTAAAGTTCAAGGAGCTCAGTCCGATTTGATCAAGTCGTCTATTGAAGAAGCTGTTGATTCGGGTGAAAATGATGGTGAGGAATGTAATTCAAAAAGATTTAATGGAGTTGATGAAAGGTGTCAAAATGATTTTCGTGTAGGTGAAGGTTCTTGTAGCTTTACGGAAATTGCTTTGGAGGAACCTGGATTATGCTCGTCCGGAGACTTTGCCTTGAACAATTCTTCTGATCCCACTCAAAGTAGCACTTTTAGTTCTGATAACTGCTCATCATGTCTAAGTGAGGGTGATAATAATACAACCTCGTCAAACCATGAAAATACAGAATCCTCAACCACATCAGATTCAGAAGATGTTACCCGGCAGTCTGAAGTAAGAAATAATTCGGATTGCATGGAAAATGTGCTGTCTGATTGTCATGAAGTTGTTATACAGAATAACCAGAATGCAAATGGTGAGGGTTTGACAAGAAGTTCAAGTTCACCGATTGGTCCGTCCTTGGATGGTACAAGAAATGATGCATTGGGAAATCATGTAGTGGAAATTGCCCAAAGTTTTGAAAATTGTTTTTCCACCGCTAATGTGTGTTCTCAACCTCAAAGTATGCTTCCGCCAGTGTCAAACCAAAATATACAATTTCCAGTGTTTCAAGCTCCTTCTACAATGGGTTATTTGCATCAAAATCCAGTTTCATGGCCAGCAGCTCCCACCAATGGATTGATGGCCTTCCCGCATTCAAATCACTATCTCTATGCTGGCCCTCTTGGATATGGCTTAAATGAGGATCCACGCTTCTGCTTGCAGTATGGAGCCTTACAGCAACCAACGCCCATATTCAACCCTGCTGTTCCAGTTTATCAGCCAGTTGCCAGAGCTAATGTCTTAAATTCAGAGGGGAGGACTCGAGTTTCCCAGCCAGCTTCTTTGTTAGAGCATCCTAATGGATCTTTTGCAGGAAGGGCCGTTTCAGCTGGAGCGATTTCCACAAGACCAGTTTGGTGTGATAATTCTGCCAAGTCACTAGAGAATAACAATGATTTTTCCTTGTTTCATTTTGGTGGACCTGTAGACCTTTCAACAGGTTGTAAATCAGCACTCGCGTCTTTGAATGGTGATACTGTTGGCGATTTTAGCTCAAAAAGTTCACCAGATCATGTCGAAAAGGTCCACAATTGCAATAAGAAAGAGACTCCTGCCATGGAGGAATACAACTTATTTGCAGCAAGTAATAACTTAAGGTTTTCAATTTTCTAA 3810 0.4087 MPGIAQRNEQLTNGSAVSTTCSVSANGFWSKNSDDVSYNQLQKFWSELSLQARQKLLRIDKQSLFEQARKNLYCSRCNGLLLEGFLQIAMYGKSLQKEGVDAHFPCNRSGGLRKLNNDGSSIINGCQDEIHDPSIHPWGGLTTARDGSLTLMTCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRLSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADSAFQYEVSDDSVQADWRQTFADASGTYHHFEWAVGTTEGKSDILEFENVGLNGCVRASGLDLGGLTACFITLRAWRLDGRCSELSVKAHSLKGQQCVHCRLIVGDGYVTITKGENIRRFFEHAEEAEEEEDDDSIDKDGNELDGECSRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEDRVHVACKEIITLEKQMKLLEEEEKEKREEEERKERRRTKEREKKLRRKERLKGKEKEKRCSELSDALGSPEISKEKLSAVADLEENNPISCSNSVIETDETNLLREDSPNIQDEEFSSECSTLKPQDLSYDDCEEEISNAKAEIGQCTIEQSMPSHRRLRCRKEFQLDVPMKWSDRRRYAVVSENSAMVGRSEPRQYGESFVASSRAMNGFNRQSRINVPTKSNGRNVGPPKYNEKFYSSKNRTNDRCDIHSCSCSLNNEYKTRIEQHSPMTRVSWETKPTSQFESAGDTSKQFYRGSKNNQVDYVHESNGRPKSKIILGNYTSRDLFQSKKVWEPTESQKKYPRSNSDSDVILRSTKVQGAQSDLIKSSIEEAVDSGENDGEECNSKRFNGVDERCQNDFRVGEGSCSFTEIALEEPGLCSSGDFALNNSSDPTQSSTFSSDNCSSCLSEGDNNTTSSNHENTESSTTSDSEDVTRQSEVRNNSDCMENVLSDCHEVVIQNNQNANGEGLTRSSSSPIGPSLDGTRNDALGNHVVEIAQSFENCFSTANVCSQPQSMLPPVSNQNIQFPVFQAPSTMGYLHQNPVSWPAAPTNGLMAFPHSNHYLYAGPLGYGLNEDPRFCLQYGALQQPTPIFNPAVPVYQPVARANVLNSEGRTRVSQPASLLEHPNGSFAGRAVSAGAISTRPVWCDNSAKSLENNNDFSLFHFGGPVDLSTGCKSALASLNGDTVGDFSSKSSPDHVEKVHNCNKKETPAMEEYNLFAASNNLRFSIF 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02048 1269 MobiDBLite consensus disorder prediction 535 549 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 947 979 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 517 562 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 419 433 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 434 448 - -
Cca03g02048 1269 Coils Coil 491 544 - -
Cca03g02048 1269 Coils Coil 626 646 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 517 534 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 947 970 - -
Cca03g02048 1269 PANTHER OS10G0105400 PROTEIN 1 1269 - -
Cca03g02048 1269 PANTHER - 1 1269 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 772 792 - -
Cca03g02048 1269 MobiDBLite consensus disorder prediction 418 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02048 Cca-Chr3 40667666 40676235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02048 - - gmx:100813046 2127.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02048 03 40667666 40676235 Cca03g02048 03 40667666 40676235 ECH
Cca03g02048 03 40667666 40676235 Cca02g00724 02 17359531 17368445 PCT