Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02043 ATGGGAAAACGGCATTGCAATTTGCAAGGCGAGCCAACTCCCCAATCCAACGACGACGTTTTCGCCTCCTTCCGTTTCCGCGGCACTCCAATCAACCGGAAGCACCGGTTCAAGCGACTCGCCAAGCCGCTGAGGCCCAAACCCAACCCATCACCACCACAGCCGCCACCCGACATTCCTTCGCCAAAAATGAAAACTTTGCCTCAACATTTCTTTCAAATCGACGCTCTGGACCTCGCTCCACGTTTGCTCGGAAAGTTTCTTCGCCGAGACGACGTCGTTCTTCAAATCACCGAGGTTGAAGCGTACAGACCAAACGACTCAGCTTCTCACGGTCGTTTTGGCGTTACTTCAAGAACTGCCCCTGTTTTTGGACCGGGTGGGCATGCCTATGTTTATCTTTGCTACGGTCTCCACACGATGCTAAATGTTGTTGCAGACAAGGAAGGAGCTGGAGCTGGTGTTTTGATACGGTCTTGTGCACCCGTTAGAGGATTGGATGTCATTCAACAGCGCCGAGGTCTGAAAACTGAGAAACCTATTCTTCTTACCGGTCCCGGAAAGGTTGGTCAGGCACTAGGTCTTTCGACAGAATGGTCCAACCATCCTCTCTATACACCTGGTGGTTTGGAACTCTTAGATGGTCCAGAGCCGGAAAACATATTGGTAGGTCCACGTGTTGGTATCCAAAATGCTTTGCCAGAGCATGTCAACGCATTGTGGAGATTTGCCATTGCAGGTACTCCTTGGATTAGTGCTCCAAAGAACACTCTCAGGCCAGCCTTATAG 789 0.5095 MGKRHCNLQGEPTPQSNDDVFASFRFRGTPINRKHRFKRLAKPLRPKPNPSPPQPPPDIPSPKMKTLPQHFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRPNDSASHGRFGVTSRTAPVFGPGGHAYVYLCYGLHTMLNVVADKEGAGAGVLIRSCAPVRGLDVIQQRRGLKTEKPILLTGPGKVGQALGLSTEWSNHPLYTPGGLELLDGPEPENILVGPRVGIQNALPEHVNALWRFAIAGTPWISAPKNTLRPAL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02043 262 MobiDBLite consensus disorder prediction 45 63 - -
Cca03g02043 262 Hamap Putative 3-methyladenine DNA glycosylase. 69 252 IPR003180 GO:0003677|GO:0003905|GO:0006284
Cca03g02043 262 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 48 259 IPR003180 GO:0003677|GO:0003905|GO:0006284
Cca03g02043 262 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g02043 262 MobiDBLite consensus disorder prediction 38 65 - -
Cca03g02043 262 Pfam Methylpurine-DNA glycosylase (MPG) 70 248 IPR003180 GO:0003677|GO:0003905|GO:0006284
Cca03g02043 262 CDD AAG 71 252 IPR003180 GO:0003677|GO:0003905|GO:0006284
Cca03g02043 262 SUPERFAMILY FMT C-terminal domain-like 64 256 IPR011034 GO:0003824
Cca03g02043 262 TIGRFAM 3mg: DNA-3-methyladenine glycosylase 67 252 IPR003180 GO:0003677|GO:0003905|GO:0006284
Cca03g02043 262 Gene3D - 61 259 IPR036995 GO:0003677|GO:0003905|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02043 K03652 - gmx:100813424 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02043 03 40619333 40622208 Cca03g02043 03 40619333 40622208 ECH