Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02041 ATGTCTGTTATAGGCGCGTGTTCACATTTTCTCTGTGGAGAGGTTTACCAGAGAGATCAACAGTGGCCACAGTGCTTCGCAAGTGGGAGAGGTTATTTGTATTCTAACAAGAGTGGTTATAATGGGAACATGTGGGTTGGAAGCAGAAAGAGAGAAGCCAAGATTAAACGAAGGAATTTGCGTGTGGAAGCGATGTGGCCAGATTTGTCAAGACCAAGCGAGATAGAGATGGAAGAAATCAATGATTGTGAACATCTTGATCAAATTCTACTTCATGCTCAACACAACTCACAACCCATCCTCATTGATTGGATGGCTACTTGGTGTAGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCTGCTGAATATCACAACAAGTAA 390 0.4179 MSVIGACSHFLCGEVYQRDQQWPQCFASGRGYLYSNKSGYNGNMWVGSRKREAKIKRRNLRVEAMWPDLSRPSEIEMEEINDCEHLDQILLHAQHNSQPILIDWMATWCRKCIYLKPKLEKLAAEYHNK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02041 129 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 129 IPR044253 GO:0009570
Cca03g02041 129 CDD TRX_family 84 128 - -
Cca03g02041 129 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 129 - -
Cca03g02041 129 SUPERFAMILY Thioredoxin-like 76 128 IPR036249 -
Cca03g02041 129 Pfam Thioredoxin 94 128 IPR013766 -
Cca03g02041 129 Gene3D Glutaredoxin 68 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02041 Cca-Chr3 40596297 40598962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02041 - - gmx:100811965 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02041 03 40596297 40598962 Cca03g02041 03 40596297 40598962 ECH