Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02034 ATGGAGCAGATTGAGCATTTCAGCCATATCCACCCTCTAACGTTCAAAGAGGAGCTGAAAAAGGACAAGAAACAAGTCGTTTGCTCAGGCTGTGAAAAACCAATTTCAGGTCCTAACTTCTCCTGCGACCAATGCGATTTCGTCCTTCACAAAACATGCGCAGAACTAGAGCGCCTCTTGAAGCACCCATTTCACCCTCAGCACCCCCTCATTCTCCTTTCCACCACCCCTTATAAGCAACACTACGCATGTGATTCATGTAGAGGACTCTTCAAGAACTTCGTATACCATTGTTTTCTTTGCGACTATGACCTTGACGTGACATGTGCTTCTCGCTGGCACCCCGATGATGGCCATAGGCATGCCTTCACGCTCTTGACAAATCCAAACTCGTTTGTTTGCTATGCATGTGGCATGCATGCAAACAGTGGCCCCGCTTGCTTATGCTCCATTTGTCAGATTTGGGTTCATTCTTACTGTGCTGAATTGCCTCTTGCTATTAGAATAAATGGCCATGACCACCGTTTGAAGCTCTCCTATGGCCGTCATCACTTTTATAGCTTGAGTAACTGGGGTGGCATAACTTGTGATGCTTGTAATGGGGCAATGAATCCGTTTGTTGCCGGTTACTTTTGTTCAAAATGCAAATTTTCTGTGCATTTGAAGTGTCCAGAACAGTACTTAAGAGAAGAGTGGGAGACTGATACAGAGGATGAGGAATCATTGAGAGGCTATGAAACTGAGGAAACCCAAGATATTGATTGGACTTTTAGTTTCTTTGGCCATGAACATTCGTTGAAGCTCGTGGAGGAACATGGTAATCAGTTATATTCTGATAAACTATGTGATGGGTGTACCCAACCCATCACGCCACGTTTCTTTTCGTGCCAAGAAGAAAATTGTGGCTTCTATGTGCACCAAAGTTGTGTTGGATTACTTAGAACGAGGCAACACCCGTTTCATGAGCACCCTCTAACTCTTCTCGCCAAGGCACCTCCTTATGATGGCATTTATAGGTGCGATGGATGCAGAACACTGAGCAATGGTTTTGTGTATCGTTGCGAAGAGTGTCAATTCGACCTTGATGTTTGTTGTGGTTCCCTACAAGAGAAAGTTGAACATGAAAGTCACGTTCATGCGTTGTTCCTTAAGAAGACAAGAGTTGCAAGGCAATGCAAAGGTTGTCATGTTTGGTCGAAACATGTGTACGTGTGTGATGTTTGTGAGGATTTTGCTATTGATAGTGGATGTGCTGGTCTTCCGTGTAAGGCGTGGCACGTGAATGACAAGCATCCACTAAGTCTAAACTATTTTGTGGAAGGGGATTTGAGGGAGTATGAATGTTGCATTTGCAATGAGAAAATGTCTTCCAAAAGTTGGTTTTATTACTGTGATGACTGTGACAATGCTGCTCATCCTTATTGTGTTGTTGGCAAGTGTAGGCGTGTCAAGTTCGGAGGGAGATTCAAATACGATTTTCACTCACACCCTCTTGCTTTGGTTGAGAAAACTGAGCAGAACAGTGAGTGTGAAGCCTGTGGTGAACGCTGCAATGGATGGACACTTGAATGTGGCCAATGCAAATGTTACTTTCATCGGGAAGGACAGTGTTTTTGGAAAGAATTTAAAAAGAGTAAAAAGTATTTGGGGTTATCAGGAATGATGAGACACAGGTATGCAGCAAACGTGTTGGCTTCCACGCCTAATGTAACCGCTAAGTGA 1722 0.439 MEQIEHFSHIHPLTFKEELKKDKKQVVCSGCEKPISGPNFSCDQCDFVLHKTCAELERLLKHPFHPQHPLILLSTTPYKQHYACDSCRGLFKNFVYHCFLCDYDLDVTCASRWHPDDGHRHAFTLLTNPNSFVCYACGMHANSGPACLCSICQIWVHSYCAELPLAIRINGHDHRLKLSYGRHHFYSLSNWGGITCDACNGAMNPFVAGYFCSKCKFSVHLKCPEQYLREEWETDTEDEESLRGYETEETQDIDWTFSFFGHEHSLKLVEEHGNQLYSDKLCDGCTQPITPRFFSCQEENCGFYVHQSCVGLLRTRQHPFHEHPLTLLAKAPPYDGIYRCDGCRTLSNGFVYRCEECQFDLDVCCGSLQEKVEHESHVHALFLKKTRVARQCKGCHVWSKHVYVCDVCEDFAIDSGCAGLPCKAWHVNDKHPLSLNYFVEGDLREYECCICNEKMSSKSWFYYCDDCDNAAHPYCVVGKCRRVKFGGRFKYDFHSHPLALVEKTEQNSECEACGERCNGWTLECGQCKCYFHREGQCFWKEFKKSKKYLGLSGMMRHRYAANVLASTPNVTAK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02034 573 SMART c1_12 262 315 IPR002219 -
Cca03g02034 573 SMART c1_12 13 59 IPR002219 -
Cca03g02034 573 SMART c1_12 181 229 IPR002219 -
Cca03g02034 573 SMART c1_12 119 166 IPR002219 -
Cca03g02034 573 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 537 - -
Cca03g02034 573 SUPERFAMILY Cysteine-rich domain 147 224 IPR046349 -
Cca03g02034 573 SMART PHD_3 447 514 IPR001965 -
Cca03g02034 573 SMART PHD_3 27 88 IPR001965 -
Cca03g02034 573 SMART PHD_3 133 216 IPR001965 -
Cca03g02034 573 SMART PHD_3 281 344 IPR001965 -
Cca03g02034 573 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 537 - -
Cca03g02034 573 Gene3D - 169 241 - -
Cca03g02034 573 Gene3D - 17 70 IPR043145 -
Cca03g02034 573 SUPERFAMILY Cysteine-rich domain 397 480 IPR046349 -
Cca03g02034 573 SUPERFAMILY Cysteine-rich domain 293 379 IPR046349 -
Cca03g02034 573 SUPERFAMILY Cysteine-rich domain 31 113 IPR046349 -
Cca03g02034 573 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 182 231 IPR002219 -
Cca03g02034 573 Pfam C1 domain 7 54 IPR004146 -
Cca03g02034 573 Pfam C1 domain 171 223 IPR004146 -
Cca03g02034 573 Pfam C1 domain 63 110 IPR004146 -
Cca03g02034 573 Pfam C1 domain 319 365 IPR004146 -
Cca03g02034 573 Pfam C1 domain 261 310 IPR004146 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02034 - - gmx:121174110 944.88