Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02025 ATGCAGAGCGGAAAGAAAGCAGGAGAGTCCCTTAAGGAAAAGGCCGCAAATATTGGCGCTTCTGCCAAGTCTGGCATGGAGAAGACCAAGGCCACTGTCCAAGAGAAGGCAGAAAGGATGACGGCACGTAATCCGGTGCAAAAGGAGATGGCAACACAGAAGAAAGACGCAAGGATGACCCAGGCGGAGCTGGAAAAGCAGGCGGCGCGTGAGCATAACGCGGCGGCGAAACAGTCGACCGCGGCGGGGCACATGGGACAGGGTCACTATACCACCGGAACTGGAACTGGGACCGGAACCGCCACGTACTCCACAACCGGGGAATATGGGCAGCCCATGGGGGCCCATCAAACGTCGGCTATGCCTGGTCATGGAACTGGGCAGCCCACGGGCCATGTGACTGAGGGAGTGGTGGGCTCCCACCCCGTTGGGGCCAATAGAGGCCCGAGTGGGACAGCTACGGCCCATAACACTCGTACCGGCGGGAACCCAAATGATTATGGGTATGGAACCGGTGGTACTTATAGTTAA 531 0.5838 MQSGKKAGESLKEKAANIGASAKSGMEKTKATVQEKAERMTARNPVQKEMATQKKDARMTQAELEKQAAREHNAAAKQSTAAGHMGQGHYTTGTGTGTGTATYSTTGEYGQPMGAHQTSAMPGHGTGQPTGHVTEGVVGSHPVGANRGPSGTATAHNTRTGGNPNDYGYGTGGTYS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02025 176 Coils Coil 59 79 - -
Cca03g02025 176 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 176 IPR005513 GO:0009793
Cca03g02025 176 MobiDBLite consensus disorder prediction 150 176 - -
Cca03g02025 176 MobiDBLite consensus disorder prediction 1 176 - -
Cca03g02025 176 MobiDBLite consensus disorder prediction 84 113 - -
Cca03g02025 176 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 176 - -
Cca03g02025 176 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Cca03g02025 176 MobiDBLite consensus disorder prediction 29 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02025 Cca-Chr3 40401035 40401679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02025 - - gmx:547828 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02025 03 40401035 40401679 Cca03g02025 03 40401035 40401679 ECH