Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01995 ATGAAAGTTAATGAAATGGTTGCTAATGAAAATAAAAATGAAGTGGCTGACGATCATTCTAGTGATTTGGAGAAAGAGCTAAAGGAAGGGAATGAAGAAGTATCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCCGTAGGTGATTCTATCACAAATGAGGACGAGACAGAAGAAAAGGCTTCAAAAGACCCTAAAAGTAAGGTTAAAGTGAATCCTTCAGAAAGCAATCGTGGATCAAGGGAAAAATCCGATAAAAAAACAAATAAAATGCAACCAAAGGTATCACTTAGCAATCAAAAGAAACCTATGAACTCAAATAAAGGGCCCTCCAAAGTTACTAACAAAAATGTATCCTCAACCAGTTCTAAGACTGTGAAAGTTCCTGTAAGTGTTTCATCAGAATCTTCTGAAGCTGATGAAAAACCTGTTCAGGATGTCAAGGAACTTGATATCGTGGATGGATCCTCCAATGGCGCTCAGAGCTTAGAAAGTGAAGATGAAAGTCATGAAACAGTTAATGCTAAAGAAAATGGTGAACATGAAGACGAGGCAGCGGCAAAATTAAGAATTGAAGAAATGGAATCACGAATTGAAAAGCTTGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGCACCGGAGCATGGCAGCTCAGCACACAAAGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTACATACATGCTTGTAAGCATTGGAGCCAAAAAAGTCGAGCAACGATTGCCAAGAATACTGTTTCTGGCCTTATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATGTCATTGTGCTGAGAGAGATAATTTCACAAGCTTTTGGGAATTCTTGTCTAGCTAGTCCCCTTAAAAGGTTGGCTGAATCAAATGGTGCTGGCAAGAGAAATGATGGGAAGTCTATGGCACTGAAATGGAAAGCTAGCTCCAATGGTAAACCAGTAAATGGTTTTATGCCTCTTATTGAAGATTGGCAAGAGACAGGAACTTATATATTCGCTCTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTATATGCAGTCTCCAGTTGGGGACTCTTCAAATAAATCCATTGGGAGGTTGATGGGACCTGCCCTGGGTGATCACAACCAAGGAAACTTTTCTGTCAATCTCTGGAGAAATGCTTTCCAAGATGCTTTTCAACGACTCTGTCCTGTTCGAGCAGGAGGGCATGAGTGTGGTTGTTTGCCTGTTTTGGCTAGAATGGTCATGGAACAGTGCATTGCTAGACTAGATGTTGCTATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAACTGATCCGATATCAGACCCTATTGTGGATTCTAAGGTTTTGCCAATTCCAGCTGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGCTGAAGAATGTCTGCAAGAAGATCAGGAAAGCAGTGAGAATGACGAAAGCCAGGGTGGAGATCGTGAACCTAAATCTTTTGTTCTCCTTAATGACTTGAGTGACCTTCTCATGCTACCTAAGGACATGCTTATGGATAGACAAATCAGACAGGAGGTGTGTCCATCCATCAGTCTTTCATTGGTTATTCGGGTTTTGTGTAACTTCACTCCGGATGAGTTCTGTCCTGACCCTGTTCCAGGAACTGTCTTGGAGGCCCTGAATGCAGAGACTATTATAGAGCGAAGATTGTCCACAGAATCTGTAAGAAGCTTCCCTTATGTGGCTGCTCCTGTTGTGTACATGCCACCCTCCTCTGCTAACGTGGCAGAGAAAGTTGCAGAGGCTGGAGGAAAGTCTCACTTGGAAAGAAACGTATCAGCTGTTCAGAGGAGAGGATACACCAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCATCTCCAACAGTCACTGATAATGGAAAAGGTAATAATCACAAAGTGCACCCCACCACAAATGCTAGATATCAACTCCTACGTGAAGTTTGGTCCATGTGA 2151 0.4235 MKVNEMVANENKNEVADDHSSDLEKELKEGNEEVSDAETVKDSVSSVGDSITNEDETEEKASKDPKSKVKVNPSESNRGSREKSDKKTNKMQPKVSLSNQKKPMNSNKGPSKVTNKNVSSTSSKTVKVPVSVSSESSEADEKPVQDVKELDIVDGSSNGAQSLESEDESHETVNAKENGEHEDEAAAKLRIEEMESRIEKLEEELREVAALEVSLYSIAPEHGSSAHKVHTPARRLSRLYIHACKHWSQKSRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNVIVLREIISQAFGNSCLASPLKRLAESNGAGKRNDGKSMALKWKASSNGKPVNGFMPLIEDWQETGTYIFALERVESWIFSRIVESVWWQALTPYMQSPVGDSSNKSIGRLMGPALGDHNQGNFSVNLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDAEECLQEDQESSENDESQGGDREPKSFVLLNDLSDLLMLPKDMLMDRQIRQEVCPSISLSLVIRVLCNFTPDEFCPDPVPGTVLEALNAETIIERRLSTESVRSFPYVAAPVVYMPPSSANVAEKVAEAGGKSHLERNVSAVQRRGYTSDEELEELDSPLTSIIDKLPSSPTVTDNGKGNNHKVHPTTNARYQLLREVWSM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01995 716 MobiDBLite consensus disorder prediction 519 539 - -
Cca03g01995 716 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 12 715 - -
Cca03g01995 716 MobiDBLite consensus disorder prediction 679 700 - -
Cca03g01995 716 Coils Coil 184 211 - -
Cca03g01995 716 MobiDBLite consensus disorder prediction 53 90 - -
Cca03g01995 716 Coils Coil 20 40 - -
Cca03g01995 716 MobiDBLite consensus disorder prediction 164 183 - -
Cca03g01995 716 MobiDBLite consensus disorder prediction 91 138 - -
Cca03g01995 716 MobiDBLite consensus disorder prediction 1 183 - -
Cca03g01995 716 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 12 715 IPR021827 GO:0005643
Cca03g01995 716 MobiDBLite consensus disorder prediction 11 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01995 Cca-Chr3 40036496 40043528 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01995 - - gmx:100804499 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01995 03 40036496 40043528 Cca03g01995 03 40036496 40043528 ECH