Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01984 ATGGCTATTCTCGCAGCGGCTGTCGTGGTGCCACTGGGCCTGCTCTTCTTCGCCTCCGGCCTCCTGGTTAATCTCATTCAGGCGGTGTGCTATGTCCTTGTGAGACCGGTGTCCAAGAATTTGTACAGACGGATCAACCGGGTAGTAGCAGAGCTGTTGTGGCTTGAACTTGTGTGGCTTATCGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCATGAAACCTTTCGTTTAATGGGTAAAGAACATGCTCTAGTGATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGCCTTGGCAGCGCTCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAAGTCAGGTATTCAACGACTGAGTGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAACGTTTTAATTCCAAGAACTAAGGGATTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCAGCCATTTATGATGTAACAGTGGCTATCCCTAAGAGTTCCGCTGCTCCTACAATGCTAAGACTCTTCAAGGGGCAACCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGAATTGCCAGAAACAGATGAGGCTGTTGCTCAATGGTGTAGAGATATATTTGTCGCCAAGGATGCTTTGTTAGACAAACATATAGCTGAGGATACCTTTAGTGATCAAGAGCTACAGGATACTGGTCGACCAATAAAGTCTCTTCTGGTAATTATATCTTGGGCTTGTCTTCTTGTTGCGGGGTCTGTGAAGTTCCTACAATGGTCTTCACTACTATCTTCCTGGAAGGGTGTTGCGTTCTCAGCTTTTGGTTTGGCAGTTGTTACTGCACTTATGCACATTTTGATTCAATTCTCACAGTCAGAGCGTTCAAACCCTTCCAAGATCGCCCCTGCCAAGTCAAAATACAAGGGGGAACAACTGGAGGCTAAGAATGATAAACAACAGTAG 1164 0.451 MAILAAAVVVPLGLLFFASGLLVNLIQAVCYVLVRPVSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDHETFRLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLKSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSAAPTMLRLFKGQPSVVHVHIKRHLMKELPETDEAVAQWCRDIFVAKDALLDKHIAEDTFSDQELQDTGRPIKSLLVIISWACLLVAGSVKFLQWSSLLSSWKGVAFSAFGLAVVTALMHILIQFSQSERSNPSKIAPAKSKYKGEQLEAKNDKQQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01984 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Cca03g01984 387 Pfam Acyltransferase 80 228 IPR002123 GO:0016746
Cca03g01984 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 40 230 - -
Cca03g01984 387 MobiDBLite consensus disorder prediction 373 387 - -
Cca03g01984 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Cca03g01984 387 SMART plsc_2 86 208 IPR002123 GO:0016746
Cca03g01984 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Cca03g01984 387 MobiDBLite consensus disorder prediction 360 387 - -
Cca03g01984 387 CDD LPLAT_LCLAT1-like 62 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01984 Cca-Chr3 39831349 39839570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01984 3 373 Miscellaneous Gene Families AT3G57650 78.167 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01984 K13523 - gmx:100792858 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01984 03 39831349 39839570 Cca03g01984 03 39831349 39839570 ECH