Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01973 ATGTCGTCAACCTCTACAAGAACTCGAATCAAGTGGCAAAAGCAAAAGCTTGAAGAAACAAAGCAACAAAGATCAATGACAAGGCCAAGTGAGAATAGTGCTTCTTCAAGCTGCCAAGAACAAGGTATTTGCAATGTTGAGGAAGATAATAAAGATGTTTGTTCAAGTTCAAGTGGCTGTGCTACACCAAAGGCTAAAAGACACAGAATACAAGAGCTGTTAACATGTCCACCAGCTCCAAAGAAGAGAAGGGCAAGGCCTAATTGCTCATCAAATAGGTCACAAATAGCATTTTTTTCTTCACCGGATATAGAGTTGTTCTTCTTTTCTGCACTCAGAAATGTTTCAGTTTGA 354 0.3927 MSSTSTRTRIKWQKQKLEETKQQRSMTRPSENSASSSCQEQGICNVEEDNKDVCSSSSGCATPKAKRHRIQELLTCPPAPKKRRARPNCSSNRSQIAFFSSPDIELFFFSALRNVSV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01973 117 PANTHER CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13 9 112 IPR040389 GO:0032875
Cca03g01973 117 MobiDBLite consensus disorder prediction 1 38 - -
Cca03g01973 117 PANTHER - 9 112 - -
Cca03g01973 117 MobiDBLite consensus disorder prediction 11 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01973 Cca-Chr3 39698225 39699243 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01973 - - aprc:113862156 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01973 03 39698225 39699243 Cca03g01973 03 39698225 39699243 ECH