Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01935 ATGGAAGACAAGACGTGGGGATGTTCTTCAAGTGAAGATAGTGATGATGAGGTCTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTCACTTTTCATCTAGTTCTATGCCCAAGTTGCAGTTTAGGAACGTGAAATCCAAAAGCTGTTGGATTGAAGAGATGGGAATGGGAGAAGTCATTGAGAAGAATGGCAAAACGTGGGTAACAACTGGAATCGTTCGCAGTGGCAAGATTTATTCTTCGATTGAGGAGACTTTGTATCTTATGGAATTAGGAGCCTTGCATCTTTTAGATAAAGGTGGTAGAAACATATCTCTAACAGAAATGTACGAAAAGGTCTCTAACAGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTATAGGCATCTCAAGTCTCTTGGCTACATAGTTGGGCGACATGGTGTTGCTTGGAGTTTGAAGAGTATTAAAAGTTCACATAAACCTGTTGACCTTGAAGTTACTGAAGAAAGCAAACTAGTACACATGGGTTCCAAATCTGAGTTTTCCATTAATAAGTTATTTGGTGAGTTGCAGATTAATGATTTGAGGCCAGATTTTGATGTTTATCTTCCGAACAGCAGGTTTAGAAAGTCTTTCCCTGGTGATCCGAGTTTTCTACTGTACTTATCTAGGGGTCATCCGCCATCTAGAGCGGAAATTGAAGCCCTTGAAAGACAGTGTGATGGCATTCCTTTGAAAATCTGCCTGGTCACAGAGGGAAGGGTCAGTTTCTTTTCCTTTGACAAGGTGCAACTTCCTGTTCTACCCTGA 795 0.4113 MEDKTWGCSSSEDSDDEVYLQNASDEEELHFSSSSMPKLQFRNVKSKSCWIEEMGMGEVIEKNGKTWVTTGIVRSGKIYSSIEETLYLMELGALHLLDKGGRNISLTEMYEKVSNRKSGCCWELFEVYRHLKSLGYIVGRHGVAWSLKSIKSSHKPVDLEVTEESKLVHMGSKSEFSINKLFGELQINDLRPDFDVYLPNSRFRKSFPGDPSFLLYLSRGHPPSRAEIEALERQCDGIPLKICLVTEGRVSFFSFDKVQLPVLP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01935 264 Pfam tRNA-splicing endonuclease subunit sen54 N-term 36 96 IPR024336 -
Cca03g01935 264 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 1 264 IPR024337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01935 Cca-Chr3 39153333 39154715 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01935 K15326 - tcc:18598903 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01935 03 39153333 39154715 Cca03g01935 03 39153333 39154715 ECH