Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01927 ATGATGGAGCAATTCTTCGATGCCCTCGCGCTCGCCGCTTTCATTTTCACTTGCAGCCTTTTCGCTGCACAGAGAGAGAGACACACTCTCTTCTTCGCTTTCTTCTTTCTCTCTGGCTGCGAGGCTCTGAATTTCGCAACATCGCGAAACCCTAGGCACTGGCTCGCTCGCGTTTCGCGCGCCCATTTTTCATTTCAAGGATATAGTTACTTGCAGTTCATGGCTTGGGATCTGTGGAGTTCGTCGTATGGGCAAGTTGCGAGTGGTAGTTATTACTCGTCACAGCATCCTGAATGTGACTTCTACTTTGGATGTGGCCGCGATGTGATAGAGGAGGATGCCTTGAACGAGGAATCCTGTGTTCAGGTTTTGAGAATTTTGATCACCAAAGCGGATACTGAGATTGAGGAACTTGAAAAGGATCTCTTGTTGCTTCAGAATGAATTGGCCTGCACTGAGCATGAAAAATGGCCTGATTTATGCTGTGGTGCTCTCACTGAGAGAATCAACCGGCTTGATGTGGCGGTTAGCACTTTGAAGAATGATCGTGCTGATGATGCAGAGATGCAGCAGCTACTGCAAAGTGAACCTGCTGAGACACTTCATGAAATAGTGAAGGCTTTACAGAGAGATTACTGTCGGGATGTACTTGTCCAGTATCTAGATATGGATATCTCAAGTCCGATTGTGAATGTTACTGAACATGCACTAGACAAAGATTCTAGCACCATTGATTCTAATGTAATCATTAAGGAGGAAGAAAAAGAACTCCATGGAACCTCAGAAAGCTCTGAAAGCTTGGAACTTCTTTTGGAGCTTCATGAAAAGAGATCAGATAATCCTGAAAAGATTGAGGAATTACCTGAAAAATCTCTTGCGAGAAGTCCCAATTTGGGGGATATCATCTGTGCAACTGATCACTCTGATGGGATGAAATTATCAGAAACATCTGATAATAAAGTTATTGGAAATGAAGAAGCCGGAAGAAGCCAACACATTAATACAGATAGAGGTCAAATCTTTGATTTGTTTTCCGCCAATGACAATGGAAATATTCCAAGTGAAGTCAAGAAAGAAAATGAATTTGTCAAAGAAAAAGATGTTAGCTCAGGTGATTTTAGACCTGCAATTGGCGTCAAGGGGAGGAAAAAGTGTCTTCATTCCAGATTAGGTTCTTCACAGCAACGAAAAAGTGGAAAATCAGATCTAGACAAAGAGCTACGTGATATTGCCCCAAAAACTGCACGAAGAGCTTGCAGGAAAGAATCCAAGGTTTCTCCAGATGAAGATTCAAACTCTCTGAATTTACCTCTACAAGTTGTTTATCCTCAAATAAATGCTGACACCGAATTCTGCTCCTTTAAAGGAAGTAATGGTAATAATTCTGGACAAGTTGAAAACTCGACCGTCATTCATGCTGAAAATTCTGCATTGATTTCACTGCTAGGGATGCAAACCAAGAGTGCCCTGTATACTGGGTTACAGCTGATAGATGAAGAAAAACAAGCGCAAGACCTTAAATCCCAAATTGCTGCTAACCTCAGCAAGTCCAATATGAGTTTCCATTCAAAACTAAAAGCTCAGGAAAAGCAGAAACTGGAACTAGAGGCATTTTCTTCCAGAGAATCACATGACAGTTATACAGAAGTTATTCCAAGTACATCCATAATTGTATCAACTAAGAGGCAGCGAAAACGTAAACCCTGTACTGATGTTGCCATTTTAAATAAGTCCATGAACCGGAAGATTAATACTAGAAGGGCAGTACAACCTGACAAGGATGAAATTGAAGGTCGTGCTATTGTTTTATATGATAGCAAATTTTCTGAACTACAAAAGAAAAGAAAAGTTTCGAAGTTGCCGATCACTGTGGACATACAAAATTCAACCCATAACTTGGACATGGGAAGCCAGGTAGATCTTCACTCTAGCAAGTCACATTCCTTGGTGGATTCTCATAATGAGACCTCATCATTGCTGCCTAATACTAACTTGAAGAGCATGACATTGACTGATTTGAGGGCCCTGGCAAAAAAATACAATGTGACTAAGTACTATAAGCTTCGAAAAGAAGCTTTGGTCGGTCAATTATTTCAGCGACTCAGTAGATGCTGA 2115 0.4118 MMEQFFDALALAAFIFTCSLFAAQRERHTLFFAFFFLSGCEALNFATSRNPRHWLARVSRAHFSFQGYSYLQFMAWDLWSSSYGQVASGSYYSSQHPECDFYFGCGRDVIEEDALNEESCVQVLRILITKADTEIEELEKDLLLLQNELACTEHEKWPDLCCGALTERINRLDVAVSTLKNDRADDAEMQQLLQSEPAETLHEIVKALQRDYCRDVLVQYLDMDISSPIVNVTEHALDKDSSTIDSNVIIKEEEKELHGTSESSESLELLLELHEKRSDNPEKIEELPEKSLARSPNLGDIICATDHSDGMKLSETSDNKVIGNEEAGRSQHINTDRGQIFDLFSANDNGNIPSEVKKENEFVKEKDVSSGDFRPAIGVKGRKKCLHSRLGSSQQRKSGKSDLDKELRDIAPKTARRACRKESKVSPDEDSNSLNLPLQVVYPQINADTEFCSFKGSNGNNSGQVENSTVIHAENSALISLLGMQTKSALYTGLQLIDEEKQAQDLKSQIAANLSKSNMSFHSKLKAQEKQKLELEAFSSRESHDSYTEVIPSTSIIVSTKRQRKRKPCTDVAILNKSMNRKINTRRAVQPDKDEIEGRAIVLYDSKFSELQKKRKVSKLPITVDIQNSTHNLDMGSQVDLHSSKSHSLVDSHNETSSLLPNTNLKSMTLTDLRALAKKYNVTKYYKLRKEALVGQLFQRLSRC 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01927 704 Gene3D - 660 699 - -
Cca03g01927 704 MobiDBLite consensus disorder prediction 384 432 - -
Cca03g01927 704 Pfam Rho termination factor, N-terminal domain 665 694 IPR011112 GO:0006353
Cca03g01927 704 Coils Coil 121 155 - -
Cca03g01927 704 SUPERFAMILY Rho N-terminal domain-like 663 701 IPR036269 -
Cca03g01927 704 MobiDBLite consensus disorder prediction 398 428 - -
Cca03g01927 704 SMART Rho_N_2_a 664 703 IPR011112 GO:0006353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01927 - - aprc:113861911 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01927 03 39037085 39044844 Cca03g01927 03 39037085 39044844 ECH