Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01923 GCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGAGATGAAGGCCGAGTTTGGAAGGAAATTTCACAGGAGGTTTACAAGGATGCAGATAGGCTTTTCAAAATGATTGGAGAAGCATATGCCATGCTTTCAGACCCAGCCAAGCGTGCGGAGTATGATTTGGAAGAGGAGATAAGGAAAGCTTCTAAGAACAGTAACAGAGGTGGCACAAGCAGGAGATCTTCGGATGTTTATGGGTATGGAAAACCATCTGATGGTTATAAATCTCCCTCTGACAGAACTTCTAACAGACGATATGGACGGGATCATTGGAAGACATATGGACATTCATATTCTCGATGGAGGCTTAAAACTGCTTCTGCAGGTCATTTCTCAAATAAGATTGCGCCATTCCGCCCGCCCGGATTGGTTGTTGCTGTTGGGAGACTGAGCTTTATTGATATGATGGAAGAACCCCCGACGGCTAGGCTGTCCTCCCCCCTACCGGTGCATCAATCCAGCGCATTTAGACCTGTCCTAGCGGAACCCTATCTTGGTTGGAGAAAGCCAGTCCAGAGAGTATGCGGTTCCATGCGCCTTGTATCAAAAACTGGATCACTGTACTTCATGCAAGATTGTCATACATGGCGCATAAACTGGTTGCGCTTTCTGTGTATTACGACCATCTCCCACCCTCCTGCGCTTTCCGTTCGCGGTGCCACGTCGCTGTTTCAACCTATTTTGACCAATAGCAGCACAATGATCCTCCCCGCACGCCCCAATTTCTTCTCTTTGCTTTTCCTAGTGCTTATTCTCCATTCCACTTCCTTCCTAGCATCAGCTTCTGATCATTCTAAAGCTGAAGATGAAGAATATACCTATGCTAAAGGAAGTAGCAAAGGGCCAGAAAATTGGTGGCGTATCAACCCAAAATGGAAAATATGTGGGGAAGGAAAACTACAATCTCCAATTGATCTTCTAGACAAAAGGGTGCAGGAGTTTCCCCAATTGGGTAAACTTGCCAAAGATTACAAACCAGCTCCTGCTGTCCTAAAGAATAGGGGTCATGACATTATGCTTCACTGGACAGGGTATGCAGGCCAGCTTAACATAAATGGAACTTACTACAAATTGCTTCAATGTCACTGGCATTCACCTTCAGAGCACACGTTGAATGGATCAAAGTTTGACTTGGAACTGCATGCAGTCCATCAAAACTCTAAAGGAGAAATTGCTGTTATTGGAATTTGGTATAAAATTGGTCTTCCAGATCCCTTGCTTTCAAAGGAAATAGATTTAGGAGTAATCAACCCAGGAGACATCAAGTTTGGAAGCAGAAAGTACTACAGATATATTGGTTCTCTTACAACTCCACCATGCACTGAAGGAGTCATTTGGACAATAGTGAAGAAGGTGAGGACAGTCTCAAGGGAGCAGCTGAGGGCCTTGAAAGAAGCTGTACATCGTGGATATGAGAAAAATGCAAGGCCAACACAGGAACTTGATGGAAGACAAATTTGGTTATATACTCCTAAGGAGAATGAAAAGCCTACTTGA 1533 0.4449 AGQLLARSEVGDEGRVWKEISQEVYKDADRLFKMIGEAYAMLSDPAKRAEYDLEEEIRKASKNSNRGGTSRRSSDVYGYGKPSDGYKSPSDRTSNRRYGRDHWKTYGHSYSRWRLKTASAGHFSNKIAPFRPPGLVVAVGRLSFIDMMEEPPTARLSSPLPVHQSSAFRPVLAEPYLGWRKPVQRVCGSMRLVSKTGSLYFMQDCHTWRINWLRFLCITTISHPPALSVRGATSLFQPILTNSSTMILPARPNFFSLLFLVLILHSTSFLASASDHSKAEDEEYTYAKGSSKGPENWWRINPKWKICGEGKLQSPIDLLDKRVQEFPQLGKLAKDYKPAPAVLKNRGHDIMLHWTGYAGQLNINGTYYKLLQCHWHSPSEHTLNGSKFDLELHAVHQNSKGEIAVIGIWYKIGLPDPLLSKEIDLGVINPGDIKFGSRKYYRYIGSLTTPPCTEGVIWTIVKKVRTVSREQLRALKEAVHRGYEKNARPTQELDGRQIWLYTPKENEKPT 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01923 510 Gene3D DnaJ domain 18 101 IPR036869 -
Cca03g01923 510 Gene3D Alpha carbonic anhydrase 280 508 IPR036398 -
Cca03g01923 510 ProSitePatterns Nt-dnaJ domain signature. 32 51 IPR018253 -
Cca03g01923 510 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 260 504 - -
Cca03g01923 510 SUPERFAMILY Carbonic anhydrase 283 499 IPR036398 -
Cca03g01923 510 Pfam Eukaryotic-type carbonic anhydrase 293 500 IPR001148 -
Cca03g01923 510 PANTHER CARBONIC ANHYDRASE 260 504 IPR023561 GO:0004089|GO:0008270
Cca03g01923 510 ProSiteProfiles Alpha-carbonic anhydrases profile. 282 502 IPR001148 -
Cca03g01923 510 SUPERFAMILY Chaperone J-domain 20 54 IPR036869 -
Cca03g01923 510 ProSitePatterns Alpha-carbonic anhydrases signature. 379 395 IPR018338 GO:0004089|GO:0008270
Cca03g01923 510 SMART Carb_anhydrase_2a 286 502 IPR001148 -
Cca03g01923 510 MobiDBLite consensus disorder prediction 58 99 - -
Cca03g01923 510 CDD alpha_CA_prokaryotic_like 293 500 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01923 Cca-Chr3 38945729 38966925 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01923 K01674 - gmx:100781864 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01923 03 38945729 38966925 Cca03g01923 03 38945729 38966925 ECH