Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01917 ATGGCGGGTGCGCATTCCCTAAGACACCACAACCAACAGCAACCCAGCTCGCGcctcctcctcctcctcaccgtcctccccctcaccctggccgccctcgccttcctcctccAATGGCGCGGCGGCGTCACCGACCCCCTCACCCGCTGGTCACCCGATCACGACCAGTTCCCCGGCATGTCCGGCTCCCCTCCCTCCCTCCGCCACCGCTCCCACGGCGATTGCAGCCACCCCTTGGCCCAATCCCACAACCCCTCCTTCCCTTACTTCCGCGACTGGGCCTTCGATTACTCCTCCCACCTCTCCCCCAAGATATGCATCACCACCAGCACTTCCGCTGGATTGGAACAGACGCTGCCCTGGATCTTCTACCACAAGGTCATCGGAGTCTCCAATTTCCTCCTCTTCGTCGAAGGGAAGGCCGCATCGCCCAATGTCACTAGGGTTTTAGAGACCATTCCCGGAGTGAAGGTTATATTTAGAACGAAGGAGCTCGAGGAGCAGCAAGCCAAGAGCCGAATATGGAATGAGACTTGGCTGGCAACCTTCTTCTACAAACCATGTAACTACGAGTTGTTTGTGAAGCAATCTTTGAACATGGAAATGGCTATTGTCATGGCAAGGGAATCTGGAATGGATTGGATCATCCATCTGGACACCGATGAGCTGATGCACGCGGCAGGAACACAAGAGTACTCTTTAAGACAGTTGTTAGCTGATGTGCCTGGAAATGTTGATATGGTTATTTTTCCAAATTATGAAAGCAGTGTGGAGCGAGATGATATCAAGGAGCCATTCAGTGAGGTTTCAATGTTCAAGAAGAACTATGACCATCTTCCAAAGGATGTATATTTTGGAAATTACAAAGAAGCAACACGTGGCAATCCAAACTATTTTCTTACTTATGGAAATGGGAAATCAGCTGCCAGGATTCAGGATCATCTCCGTCCAAATGGTGCCCATAGATGGCACAACTATATGAAGACACCTAATGAGATAAAATTGGAAGAAGCTGCTGTTCTGCACTACACCTACACCAAATTTTCTGATTTAACTTCAAGACGTGATCGGTGTGGCTGCAAGCCTACAAAAGAAGATGTTAAAAGATGCTTCATGTTGGACTTTGACAGATCTGCATTCATAATTGCTTCAACTGCAACCGAGGAAGAAATGCTTCAATGGTACCGTGAACGCATAGTGTGGACTGACAAAGCACTCAAAATGAAACTTATGAGGAAAGGCATCTTGACTCGTATTTATGCTCCCATGATTATTATTCAAAGTTTGAGGGAATCTGGTGCTTTTAGCTCTTTGATTGCAAAAGCTGCTCAAACAAAGTTATCAAAAGACAATTTTCTAAGATCTGTTGAGAGTAGCAATTCAACTAGGAATTCCAGATCTGAAATGGTATCTTCTAGAAAAATTGATGCTGGTGGATTATCCCAAGCAACTGCAAGAAGAATTTTGGAAGTAATAGATGACTCACTCCCATTGGCAGTGCCACCGTTATCCCCTCCCACCCATGATCATGCTGACCTTATAATATCTTAG 1551 0.4462 MAGAHSLRHHNQQQPSSRLLLLLTVLPLTLAALAFLLQWRGGVTDPLTRWSPDHDQFPGMSGSPPSLRHRSHGDCSHPLAQSHNPSFPYFRDWAFDYSSHLSPKICITTSTSAGLEQTLPWIFYHKVIGVSNFLLFVEGKAASPNVTRVLETIPGVKVIFRTKELEEQQAKSRIWNETWLATFFYKPCNYELFVKQSLNMEMAIVMARESGMDWIIHLDTDELMHAAGTQEYSLRQLLADVPGNVDMVIFPNYESSVERDDIKEPFSEVSMFKKNYDHLPKDVYFGNYKEATRGNPNYFLTYGNGKSAARIQDHLRPNGAHRWHNYMKTPNEIKLEEAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRSAFIIASTATEEEMLQWYRERIVWTDKALKMKLMRKGILTRIYAPMIIIQSLRESGAFSSLIAKAAQTKLSKDNFLRSVESSNSTRNSRSEMVSSRKIDAGGLSQATARRILEVIDDSLPLAVPPLSPPTHDHADLIIS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01917 516 MobiDBLite consensus disorder prediction 54 75 - -
Cca03g01917 516 PANTHER GLYCOSYLTRANSFERASE-LIKE KOBITO 1 5 513 IPR044224 GO:0009737|GO:0030244
Cca03g01917 516 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 5 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01917 Cca-Chr3 38788696 38794222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01917 - - gmx:100806614 909.827