Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01914 ATGCGCAATTTAGAGGGGGCGAAACGAAAGGATCAGTCCGAAGCTGCGGTTCGGGAAAAAAGAGTGGGACCCACGGAGGTAGGTTTGGTGAAGGCCCCGTCCAGTGTGCGTCTTGGTTCGGACGCAACGGTGCAGAGGGCAAGTTCAATTTATTTGTCTGTAGCTTTTTCGCTCTCACTCGGCCTCGCAGTGTCTGCTACTCCGCGCCGTCTCGCTGGCCATCGTTTCACCGCCCTCTACGGTGGTGCTTCATCGAAGCTCAGGGACTTCATGAATAGGTGGTTTGTCACCTGCTCACCATCATCCCTTGACATTATTGTAGCCTTTACTTGCAATGAAGTCTTGCTTCCTAGTTCTAGTCCTGGCATTGAGGGGATCATTCATGACACATGTGGGATCATGCCTTCATTTCTTGAAGATAAGTCCAAGTTCTCTGTACTTGGTCTGTGTGTTACTGACCCTACTACTAGTAATAGTTTGATGAATGAGATTGAAGATGACAAAAAGAAGTTCTCTGAGTATGGCAATGCTTTGGAAGAGGAAAGTACAGATAGAAAGAATAACTGTAGGAGTTGCCGTTGCTTCCAGTTAGATGGTTCATTGAGGAAAAGTAGCCAATATATTCTTGGAAATAGTAATCGGGTCCTGCTCATGTTTGATTCTCCTGAACAGAATGATGTAGGAATACAAAGGCTTCCAAAATTGCATCACATTCATTGGAATGGACTAATTGTGTCACAATATGATGTTCACGTTATAATTTATGAAACACCCTCTTATGGTGCTCATCATTTCTCCTTATGCCATTTGGGTTCAAATGAGCAAGCTAAAGCTTCCATTAAAAATCCTAAATGGGTCGATGAGCTTCATAAAAAGCAGCAATTCAATGAATTGGATACTGTTATTCTTGCAATTAATTGCACAGCTGCTGCTAAAAGAATTTTTGAGACACACCTGGTCCCAAGAAGATCCTTGAGTCAGCTTCCCATATTTTCCATGCTTTTTGTGGTCATGGGGCATCTATTTTCCAAATTATTGGCTTCATTCTCCACCATGTTCTATATTGTTCTTCAGTTTTTTCAAACACATTTTAATTATGAATCAGAATCATGGATGTATGTGACATCAGCAAATGTATTCATGAAGACTGCTTGGACAAATATGCAATACCGTTGTTGTCAGATATTATATTGGCCAATCTTTCTTCAGCAGAAGGACCTCAGGTCACAATCATGTGTTGAATATGTAGAGAAAGCTGCAATGCATAGGCATTCTATGTGGTCAACTTTGGTTGTTGATATTCTCTTAGGAAACTTGGTTGGCTGGGCATTATTATATCATGCAGAATCCATTTGCTCAGTTTTGAGCTTAATGCATGGCTTTTCCACATTTTTGCGCTCTGGGTGTGTGTGGTTAATGGGAAACCCTGCAGGCTTCAAATTAAATGCTGAGCTGGCTGGAGTACTTGGCATGGTTTCTTTGAATGCAGTCCAAATATGGTCAACACTCTGGATCTCCGTAGGTTTCATCTTCAATTATATTATTCAAGGGCTTTCTGTTTTAGGAATCCTTTTTGGATTCACTGTACCTGCTGCTCTGGTAATAGACATGATTGCACTGGCAACTTTGCACGTTTCAACTCTTCATTGGTTCATTTCACTTGTATATTCATCACAGATACAGGCATTAGCAGCCTTATGGCGGCTTTTCAGGTAG 1716 0.4172 MRNLEGAKRKDQSEAAVREKRVGPTEVGLVKAPSSVRLGSDATVQRASSIYLSVAFSLSLGLAVSATPRRLAGHRFTALYGGASSKLRDFMNRWFVTCSPSSLDIIVAFTCNEVLLPSSSPGIEGIIHDTCGIMPSFLEDKSKFSVLGLCVTDPTTSNSLMNEIEDDKKKFSEYGNALEEESTDRKNNCRSCRCFQLDGSLRKSSQYILGNSNRVLLMFDSPEQNDVGIQRLPKLHHIHWNGLIVSQYDVHVIIYETPSYGAHHFSLCHLGSNEQAKASIKNPKWVDELHKKQQFNELDTVILAINCTAAAKRIFETHLVPRRSLSQLPIFSMLFVVMGHLFSKLLASFSTMFYIVLQFFQTHFNYESESWMYVTSANVFMKTAWTNMQYRCCQILYWPIFLQQKDLRSQSCVEYVEKAAMHRHSMWSTLVVDILLGNLVGWALLYHAESICSVLSLMHGFSTFLRSGCVWLMGNPAGFKLNAELAGVLGMVSLNAVQIWSTLWISVGFIFNYIIQGLSVLGILFGFTVPAALVIDMIALATLHVSTLHWFISLVYSSQIQALAALWRLFR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01914 571 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g01914 571 Pfam N-acetylglucosaminyl transferase component (Gpi1) 386 571 IPR007720 GO:0006506|GO:0016021
Cca03g01914 571 PANTHER N-ACETYLGLUCOSAMINYL TRANSFERASE COMPONENT FAMILY PROTEIN / GPI1 FAMILY PROTEIN 88 571 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01914 K03860 - gmx:100805383 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01914 03 38740072 38754251 Cca03g01914 03 38740072 38754251 ECH