Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01911 ATGGGATCAGAAAGAGAGTCTCATCTTTCTCTACCTGTCATTGATTTCAGTGATGAAAACCTTAAACCTGGCACTGACACATGGGTTTCCACTTGTGATGTTGTGAGGGGTGCATTAGAGGATCATGGTGGATTCCTAGCACTCTATGATAAGGTTGATCCATTGCTCTATGACTCTGTCTTCTCTGCAATGGAACAACTCTTTGATCTTCCATTGGAAACAAAAATGCAACACACCACTGATAAACCTATCTATAGCTATGCAGGGCAACGCCCTGATATTCCTTTGTATGAATCCATGGCCATAGACAATCCATTGAATGCTAAAGATTGTCACAACTACACAACTACCATGTGGCCACAAGGGAATGACCGTTTCagTGAAAGTGTGAATTCCTATGCAAAGAAAGTGGCAGAACTGGATTATGTTGTTAAGAAAATGGTGTTTGAGAGCTATGGATTGGAGAATCAGAAATGTGAGTCTTTGCTTGAATCAACCGATTATATTCTCAGATGCTACAAATACAGAACACCAAAGGTGGATGAGACCAACTTAGGAGTGCGTCCTCATACAGATTCAGGCTTCCTAACTATATTGAATCAAAGATTAAATGGCTTAGAAATTCAATTGAAGGATGGAGAGTGGTTCAAGGTTGATGCCTCACCCTCCATGTTTGCTGTCTTGGCTGGTGATGCATTCATGGTATGGAGTAATGATAGGATACGAGGTTGTGTACACCAAGTATTCATGAACTCAGAGGTAGAGAGATACAGCTTGGGGTTGCTTTCATATGCTGGGAAGGTGATGGAACCAGAAGAAAACTTAGTAGATGAGGAACATCCTCTTCGTTATAAACCATTTGACCATTATGGATATCTTCGTTTCTTCCTCACAGAAGAAGCTGTAAAATCTTCATCTAGGATCAAGGCCTATTGTGGTATTTGA 945 0.4074 MGSERESHLSLPVIDFSDENLKPGTDTWVSTCDVVRGALEDHGGFLALYDKVDPLLYDSVFSAMEQLFDLPLETKMQHTTDKPIYSYAGQRPDIPLYESMAIDNPLNAKDCHNYTTTMWPQGNDRFSESVNSYAKKVAELDYVVKKMVFESYGLENQKCESLLESTDYILRCYKYRTPKVDETNLGVRPHTDSGFLTILNQRLNGLEIQLKDGEWFKVDASPSMFAVLAGDAFMVWSNDRIRGCVHQVFMNSEVERYSLGLLSYAGKVMEPEENLVDEEHPLRYKPFDHYGYLRFFLTEEAVKSSSRIKAYCGI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01911 314 SUPERFAMILY Clavaminate synthase-like 7 299 - -
Cca03g01911 314 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 7 313 - -
Cca03g01911 314 Pfam 2OG-Fe(II) oxygenase superfamily 175 259 IPR044861 -
Cca03g01911 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 270 IPR005123 -
Cca03g01911 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 313 - -
Cca03g01911 314 Gene3D - 1 303 IPR027443 -
Cca03g01911 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 88 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01911 Cca-Chr3 38713684 38715663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01911 7 285 Glycosyltransferase AT5G59530 23.368 1.45e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01911 - - gmx:100817683 587.8