Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01907 ATGGCTCAATTACTATCATCTTCTTGCTCCTTGACTATCTGCTCTAGAAATAAACCTTACTTAAAATCTTTTAATCAATGTTCAATGCCATTTTCCATCACGGTTGCTACCAATATTTCCAAACCTACACTTAGAAGGCTTTTCTTGCAAGAACAGAAGCGAAGGAAAGGTTCTGTAGTAGCACATGCTGCTTCCATTTCAACTAGCCAGAAAACACCTGTTCAAACTAGCTCTGGTGACCCTTCTAAAGCACAGCGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCCCTTCACCTTTCTAACAAGGGTTATGAGGTTGCCATCGTTGACAGCCTTGTTCGGCGCCTATTTGATCACCAGCTTGGACTGGATTCTCTAACACCAATTACCTCAATCCAGAATCGCCTTCAATGTTGGAAATCTCTCACTGGAAAAAATATTGAGCTCTACATCGGTGACATATGTGATTTTGAGTTCTTATCTGAAACCTTCAAGTCATTTGAACCCGATGCTGTTGTCCACTTTGGGGAACAGCGATCTGCTCCATACTCTATGATAGATCGGTCAAGAGCTGTGTATACCCAGCAAAACAATGTTATTGGGACACTGAATGTGCTCTTTGCCATAAAAGAGTACAGAGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGCGAATACGGGACCCCAAATATTGATATTGAGGAAGGTTATATTACCATTACTCACAACGGAAGGACAGACACGTTGCCATATCCCAAGCAAGCTAGCTCATTCTATCATCTAAGCAAGGTACATGATTCACATAACATAGCTTTTACTTGCAAAGCTTGGGGGATTCGAGCTACTGATCTGAATCAAGGAGTGGTATATGGGGTAAGAACAGATGAGACAGCATTGCATGAAGAGCTGTATAACAGGTTTGATTATGATGGAATATTTGGAACTGCATTGAATCGGTTCTGTGTTCAGGCTGCTGTTGGTCATCCACTTACTGTATATGGTAAAGGAGGCCAGACTAGGGGCTTCCTGGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCCATCGCAAACCCTGCAAAGCCGGGGGAATTTAGAGTCTTCAACCAATTCACTGAGCAGTTTTCAGTCAATCAACTTGCCAGCCTTGTTACAAAAGCTGGTGAGAAGCTTGGCCTTGATGTGAAAACTATACATGTGCCTAACCCGAGAGTTGAGGCAGAAGAACATTACTACAATTGCAAGAACACTAAACTAGTTGATTTGGGATTGAGACCACACTTTCTTTCAGATTCTCTCCTTGATTCACTGCTCAACTTTGCTATTCAGTACAAAGATCGTGTTGACACAAAACAAATTATGCCTAGTGTGTCTTGGAAAAAAATTGGTGTCAAAACAAAAACTGTTACAGCCTAA 1434 0.4205 MAQLLSSSCSLTICSRNKPYLKSFNQCSMPFSITVATNISKPTLRRLFLQEQKRRKGSVVAHAASISTSQKTPVQTSSGDPSKAQRVMVIGGDGYCGWATALHLSNKGYEVAIVDSLVRRLFDHQLGLDSLTPITSIQNRLQCWKSLTGKNIELYIGDICDFEFLSETFKSFEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEYREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETALHEELYNRFDYDGIFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNQLASLVTKAGEKLGLDVKTIHVPNPRVEAEEHYYNCKNTKLVDLGLRPHFLSDSLLDSLLNFAIQYKDRVDTKQIMPSVSWKKIGVKTKTVTA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01907 477 PANTHER BNAA03G52320D PROTEIN 57 475 - -
Cca03g01907 477 Pfam NAD dependent epimerase/dehydratase family 87 374 IPR001509 -
Cca03g01907 477 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 57 475 - -
Cca03g01907 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 457 IPR036291 -
Cca03g01907 477 CDD SQD1_like_SDR_e 86 466 - -
Cca03g01907 477 Gene3D - 293 454 - -
Cca03g01907 477 MobiDBLite consensus disorder prediction 62 82 - -
Cca03g01907 477 Gene3D - 86 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01907 Cca-Chr3 38687438 38690586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01907 1 476 Acyl Lipid Metabolism Gene Families AT4G33030 78.125 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01907 K06118 - gmx:100816616 894.034