Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01899 ATGAGGTCCCAACTGCACATCGCGGCGTCCTTTGCGGCGGTTGTCGTCATTGCTTGGATTGCGCACAACGGCGGCCTTGGGCCATCGGAGGAGGAGGCTCCGCAGTTGGAGGCTGTTCCGATTGACGGCGCCGTCGGGCCGGAGAGCTTGGCCTTCGATCCTCGCGGCGAGGGCCCTTACACGGGGGTTTCCGACGGTCGAATCATCAAGTGGCACCGCGCTCTCAATCGTTGGCTCAACTTTTCCGCAACTTCTTCGCACAGGGATGATGAATGTGGAGGAGCATGTGATGAGCATCCCAAGAAAGAGCACATATGTGGGCGTCCACTTGGGTTATGCTTTAGCATTCCATCGAGTGACCTTTACATCGCTGATGCTTACAAAGGCTTAGTTGTTGTTGGCCTCAATGGTGGCACTGCTAGAAGACTCATATCAACTGTAAAAGGTGAACCCTTGGCATTTACAAATGGCTTGGATGTTGATCAACGAACTGGAGCAGTGTACTTCACCAGCAGTAGTTCAAAACATCAAAGGAGGAATTACATCTCTTTGATCCTAAGCAGAGAAAAAACGGGGAAGCTAATGAAATATGAACCACAAAGTGAAAAAGTTAGCATTCTTGTAAACAATCTATCGTTTGCAAATGGAGTAGCATTAAGCAAAGATGGTGACTATATTCTAATAATAGAGACCACAACCTGTAGAGTTCTAAGGTATTGGCTAGAAACACCAAAAATTGGAACCTTGGAAGTCTTTGCCGATTTACCAGGTTTCCCAGACAACATCAAACGGAGTCCAAGAGGGGGATTTTGGGTGGGAATTTACTCAAGAAGGGAAAAGCTTATCCAATGGATTCTATCATATCCTTGGATTGGAAAAGTTTTGCTTAGGCTTCCTTTGGACATTACAAAAGCTTATTCATATTTGGCTAAGCTGAAAAGGAGTACTGGATTAGCAATTAGGCTAAGTGAGCAGGGTAATATATTAGAAATTTTTGAAGACAAAATTGGGAACAGAGGGAGGTCTATTAGTGAAGTGGAGGAGAGAGATGGAATATTATGGGTGGGATCTATAGATGCACCTTTTGTTGCTAAGTATAATATCATTGATGCAAAAGAACAAGGCAAAAGGATTTGA 1137 0.4494 MRSQLHIAASFAAVVVIAWIAHNGGLGPSEEEAPQLEAVPIDGAVGPESLAFDPRGEGPYTGVSDGRIIKWHRALNRWLNFSATSSHRDDECGGACDEHPKKEHICGRPLGLCFSIPSSDLYIADAYKGLVVVGLNGGTARRLISTVKGEPLAFTNGLDVDQRTGAVYFTSSSSKHQRRNYISLILSREKTGKLMKYEPQSEKVSILVNNLSFANGVALSKDGDYILIIETTTCRVLRYWLETPKIGTLEVFADLPGFPDNIKRSPRGGFWVGIYSRREKLIQWILSYPWIGKVLLRLPLDITKAYSYLAKLKRSTGLAIRLSEQGNILEIFEDKIGNRGRSISEVEERDGILWVGSIDAPFVAKYNIIDAKEQGKRI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01899 378 PANTHER STRICTOSIDINE SYNTHASE-RELATED 35 363 - -
Cca03g01899 378 SUPERFAMILY Calcium-dependent phosphotriesterase 37 366 - -
Cca03g01899 378 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 35 363 - -
Cca03g01899 378 Pfam Strictosidine synthase 156 243 IPR018119 GO:0009058|GO:0016844
Cca03g01899 378 Pfam Strictosidine synthase-like, N-terminal 35 71 - -
Cca03g01899 378 Gene3D - 36 376 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01899 Cca-Chr3 38554104 38559835 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01899 - - gmx:100789150 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01899 03 38554104 38559835 Cca03g01899 03 38554104 38559835 ECH