Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01898 ATGAAGTCAGGGCTCATTACTGCTGCAACCTTGCTTGCACTCTTCGCTTTCTTCAACCCGCAAACCCTCTTTTCTCCGCCTCATCTTCCTCTATCCAAGGATCACCTCCACGCAGCTCAGATCCTCCATGTCACCGGAGCCCTCGGCCCGGAGAGTCTCGTCTTCGACGCTCAAGGCGGAGGGCCCTACACCGGCGTCGCCGACGGCCGGATTCTCAAGTGGGAGGGGGAGGACCGAGGTTGGACTCAATTTGCTGTCACCACTTCCAATAGGTCGGATTGTGTACGTCCATTTGCACCAGAATTGGAGCACATTTGTGGGAGGCCTCTAGGACTAAAATTTGATAAGAAAAGTGGAGATCTGTACATTGCTGATGCCTACCTAGGCCTAAAAGTAGTGGGACCTACAGGGGGTTTGGCCACTGAAGTAGTAACAGAAGCTGAAGGTCAACCCTTGCACTTCACCAATGACATGGACATCAGTGAAGATGAAGATGTCATTTACTTCACTGATTCAAGCACAATGTTCCAGAGAAGGCAATTCATGCTTGTACTCTTAAGTGGAGACAAGAGCGGCCGGTTAATGAAATATAACAAGTCAACAAAAGAAGTAACGGTCTTATTGCGGGGCCTTGCTTTTCCCAATGGCGTTGCTTTAAGCAAAGATGGTTCATTTCTTCTGGTAGCAGAAACCACTACTTTCAGGATCTTGCAGCTTTGGCTTCATGGACCCAAGGCTGGTCAAGTGAACACTTTCGCAGTTGTGCCTGGTTTTCCAGACAATGTTAGAAGAAATTCAGAAGGGCATTTCTGGGTAGCTCTGCATGCAAAGGGAAGTCCTTTTGCAAAGTGGATTTCTTCCAATCCTTGGGCGGGAAAGGCAATGCTGAAGCTTGGATTAAACGTCAAGCAGTTGCACTCATCAATTGCAGGGGGGAAGCCTCATGCTGCTGCTGTTAAGCTAAGTGATAAAGGAGAAATATTAGAAGTGTTGGAAGATATTGAAGGGAAGACATTGAAGTTCATCAGCGAAGTGGAAGAGAGAGATGGGAAGCTTTGGATTGCATCAGTGTTGATGCCTTTCATCGGCATTTATGGTTTATGA 1104 0.4764 MKSGLITAATLLALFAFFNPQTLFSPPHLPLSKDHLHAAQILHVTGALGPESLVFDAQGGGPYTGVADGRILKWEGEDRGWTQFAVTTSNRSDCVRPFAPELEHICGRPLGLKFDKKSGDLYIADAYLGLKVVGPTGGLATEVVTEAEGQPLHFTNDMDISEDEDVIYFTDSSTMFQRRQFMLVLLSGDKSGRLMKYNKSTKEVTVLLRGLAFPNGVALSKDGSFLLVAETTTFRILQLWLHGPKAGQVNTFAVVPGFPDNVRRNSEGHFWVALHAKGSPFAKWISSNPWAGKAMLKLGLNVKQLHSSIAGGKPHAAAVKLSDKGEILEVLEDIEGKTLKFISEVEERDGKLWIASVLMPFIGIYGL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01898 367 Pfam Strictosidine synthase-like, N-terminal 34 74 - -
Cca03g01898 367 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 365 - -
Cca03g01898 367 SUPERFAMILY Calcium-dependent phosphotriesterase 14 362 - -
Cca03g01898 367 Pfam Strictosidine synthase 156 243 IPR018119 GO:0009058|GO:0016844
Cca03g01898 367 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 6 365 - -
Cca03g01898 367 Gene3D - 32 366 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01898 Cca-Chr3 38545613 38550054 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01898 - - gmx:100815025 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01898 03 38545613 38550054 Cca03g01898 03 38545613 38550054 ECH