Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01883 ATGATTGGGAAAGACAGCGGTGTTATGAAGGCATGGGAGGCAACGATGAGAAAGACACATGCAGTTGCCAAGAAGCGTGCCAACAGCATATTCGGGACGATATCTTTGGCACATGTTACGGATGAAGAAGATAACAATGATGATAATGAGGAGGACGAGAGTTGGAACGAGGCGTTTGAAGTGTACATTGAAGAGAAGGTTCTGTCAAACGGGGATTACTATACTGGTGAATGGGCGAATAACTTCCCACATGGGTTAGGGAAATATCTTTGGACCGATGGGTGCATGTACGTTGGAGATTGGTTTAAAGGGAAAACGAAGGGAAAGGGTAGGTTCAGTTGGCCTTCAGGGGCCACGTATGAGGGAGAGTTCAAGGGTGGTTACATGGATGGGACAGGGACATACACAGGGTCTAACGGCGAGACTTACAAGGGGCAGTGGGTGATGAACTTGAAACATGGTCATGGTTTCAAGAGTTATGTGAATGGGGATTGGTATGATGGGGAGTGGAGGAGGGATTTGCAAGATGGGGAGGGGAGGTATGAGTGGCAGGATGAGAGTCATTACGTGGGGGAGTGGAGGAATGGGAGTATATGGGGCAAAGGGAAATTTGTTTGGGCTAATGGGAAAGTGTTTGAAGGGTTTTGGGAAGATGGTTTGCCAAAGGGGAATGGGACATTCAAGTGGCCTGATGGGAGTTTCTATGAGGGGACTTTCAGCAAAGATGGTAAGGATCCGAGTGGGACATACCATCCAAATCCAATTGAGGAAGAGGGGGAGGAGAATCATAAGGAATGGGATCCTCAAGAGTTGTATAGTGAGTTGAGTGGTTACGTGGTGTGCCCTGGGGAGAAGGCTCAGGGTATGCCTTCAAATAAGAGGCTCTCGGTTTGGAGGTCTACCAAGGCAGGGGAGAATGCCAGGAATAGGAGGATGTCGGTGGATGGAAGGGTCAGTATTGGGTTGGAGAGGTGGGATGGTGGAGAGAGTGATGCAAGTGGTGCTAGAACTCCATCTAGGGTGAGTGATCTTGATGAGGATTTGATGGCTTCGCGTGTGGATGATGCTGCTGCTGCTGAAACCCAGGGTCAGCTTCTGCCTCTCAAAGCACCTAAGAAAGCAAAGAGGCAGGGTGAGACTATTAACAAAGGACACAAGAATTATGAGCTCATGCTCAATTTGCAGCTGGGAATCAGGCATTCTGTTGCAAGGCCTGCTCCCACAGCATCCCTTGATCTGAAGCCTTCAGCTTTTGATCCCAAGGAGAAAGTGTGGACAAGATTTCCACCCGAAGGGTCCAAATATACTCCACCACATCCATCGTGTGACTTTAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAGCTCTTAGGAAGCTATTTAAGGTGGACCCAGCTGATTACATGTTATCCCTATGTGGAAGTGCGGCCCTTCGAGAACTTTCTTCTCCAGGAAAAAGTGGCAGCTTCTTTTACTTGACCAATGACGACCGTTATATGATTAAGACGATGAAGAAAGCTGAAGTGAAAGTTCTATTGAGAATGCTTCCGGCCTATTACAATAATTTTCGAGACCACGAAAATACTCTTTTGACAAAGTATTATGGCTTGCATTGTGTAAAGTTAAATGGACCTATTCAGAGGAAGGTTCGGTTTATCATAATGGGAAACCTCTTTCGTTCTCAGTATATCACCCATAGACGCTACGATTTGAAGGGTTCTTCACTTGGACGCACCTCAGATAAGCCTGAGACTGAGATTAGTGAAACCACCATACTTAAAGATCTTGATCTTAATTTTATATTTCGACTGGAGAAGCCCCGGTTTCAAGACTTTTGCAGTCAAATTGATAGGGACTGTGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTTTGCTAGTGGGCATTCATTTCAAAGATATATCGCCAGATGGGGAAGTTATTCCTTTACAATCAGGAGCTCCTGCTACTGTTGATTCAGAAAATGAAGAAACTCCCCAAACTTCAAGCGAAGACACCGATCAACTTCCTCCTAAACCTTCAAGTGTCAAATTGGGTATGAATATGCCAGCAAGGATTGAAAGGACAGTGAGAAAAAGTGGTTGCGAATTACAACTTGTAGGAGAACCAATTGGAGAGTTCTACAATGTTGTGTTGACTTTTGGTATCATTGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGCCTACAAATCCATTCAATATGACCCGACCTCAATATCAGCTGTGGATCCTATACAATACTCAAGGCGTTTTCGTGATTTCATATTTAAAATATTCACTGAAGATTCTTGA 2328 0.4506 MIGKDSGVMKAWEATMRKTHAVAKKRANSIFGTISLAHVTDEEDNNDDNEEDESWNEAFEVYIEEKVLSNGDYYTGEWANNFPHGLGKYLWTDGCMYVGDWFKGKTKGKGRFSWPSGATYEGEFKGGYMDGTGTYTGSNGETYKGQWVMNLKHGHGFKSYVNGDWYDGEWRRDLQDGEGRYEWQDESHYVGEWRNGSIWGKGKFVWANGKVFEGFWEDGLPKGNGTFKWPDGSFYEGTFSKDGKDPSGTYHPNPIEEEGEENHKEWDPQELYSELSGYVVCPGEKAQGMPSNKRLSVWRSTKAGENARNRRMSVDGRVSIGLERWDGGESDASGARTPSRVSDLDEDLMASRVDDAAAAETQGQLLPLKAPKKAKRQGETINKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRALRKLFKVDPADYMLSLCGSAALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRMLPAYYNNFRDHENTLLTKYYGLHCVKLNGPIQRKVRFIIMGNLFRSQYITHRRYDLKGSSLGRTSDKPETEISETTILKDLDLNFIFRLEKPRFQDFCSQIDRDCELLEQEGIMDYSLLVGIHFKDISPDGEVIPLQSGAPATVDSENEETPQTSSEDTDQLPPKPSSVKLGMNMPARIERTVRKSGCELQLVGEPIGEFYNVVLTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPIQYSRRFRDFIFKIFTEDS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01883 775 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 373 557 IPR027484 -
Cca03g01883 775 SMART morn 210 231 IPR003409 -
Cca03g01883 775 SMART morn 118 139 IPR003409 -
Cca03g01883 775 SMART morn 233 254 IPR003409 -
Cca03g01883 775 SMART morn 141 162 IPR003409 -
Cca03g01883 775 SMART morn 95 116 IPR003409 -
Cca03g01883 775 SMART morn 164 185 IPR003409 -
Cca03g01883 775 SMART morn 72 93 IPR003409 -
Cca03g01883 775 SMART morn 187 208 IPR003409 -
Cca03g01883 775 MobiDBLite consensus disorder prediction 238 266 - -
Cca03g01883 775 Pfam MORN repeat 143 164 IPR003409 -
Cca03g01883 775 Pfam MORN repeat 212 233 IPR003409 -
Cca03g01883 775 Pfam MORN repeat 74 96 IPR003409 -
Cca03g01883 775 Pfam MORN repeat 97 118 IPR003409 -
Cca03g01883 775 Pfam MORN repeat 189 210 IPR003409 -
Cca03g01883 775 Pfam MORN repeat 166 185 IPR003409 -
Cca03g01883 775 Pfam MORN repeat 120 141 IPR003409 -
Cca03g01883 775 Gene3D - 104 148 - -
Cca03g01883 775 Gene3D - 196 253 - -
Cca03g01883 775 Gene3D - 65 103 - -
Cca03g01883 775 Gene3D - 149 195 - -
Cca03g01883 775 SMART PIPK_2 414 772 IPR002498 GO:0016307|GO:0046488
Cca03g01883 775 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 19 774 - -
Cca03g01883 775 Gene3D - 558 771 - -
Cca03g01883 775 PIRSF PIP5K_plant 9 775 IPR017163 GO:0005524|GO:0016308
Cca03g01883 775 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 774 IPR023610 -
Cca03g01883 775 MobiDBLite consensus disorder prediction 656 678 - -
Cca03g01883 775 MobiDBLite consensus disorder prediction 650 688 - -
Cca03g01883 775 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 473 770 IPR002498 GO:0016307|GO:0046488
Cca03g01883 775 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 69 196 - -
Cca03g01883 775 CDD PIPKc_AtPIP5K_like 387 770 - -
Cca03g01883 775 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 380 771 IPR002498 GO:0016307|GO:0046488
Cca03g01883 775 SUPERFAMILY SAICAR synthase-like 383 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01883 Cca-Chr3 38277359 38282800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01883 1 775 Acyl Lipid Metabolism Gene Families AT3G56960 63.602 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01883 K00889 - gmx:100781141 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01883 03 38277359 38282800 Cca03g01883 03 38277359 38282800 ECH