Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01880 ATGGAGAGCATGAGCACATCCAACTCAGTGACGCGAAGCAACAGCGTGCAACAACGAACACCCACCAAAAAAACCAAATCCAAGAAAAAGCCTCACCCCGTTAAGGTTGTCTACATATCCAACCCCATGAAGATCAACACCAGCGCCGCCGAGTTCCGCGCCTTGGTGCAAGAGCTCACCGGCCAGGACGCCGAGTCGCCGCCCGACCCCGCCCGCTTCCACGCCGCCGGAGAACTTCACCGCTCCTCCCCCGGCCCCCACGATAGCTGCGTGCTCCCTCCCCCACCGGATCCCACCGATTTCCAGGGTCAACCGCTTCCCTCTTCCATTGACCCTTTCGACGACGACGACGTTTTCACTCCGCAGATGATAGACAACATTTCCGCCTTGCTTCCAGCGACTCTATTCTACGAATCTCCCCATCTCAATCACTGGTGA 438 0.5799 MESMSTSNSVTRSNSVQQRTPTKKTKSKKKPHPVKVVYISNPMKINTSAAEFRALVQELTGQDAESPPDPARFHAAGELHRSSPGPHDSCVLPPPPDPTDFQGQPLPSSIDPFDDDDVFTPQMIDNISALLPATLFYESPHLNHW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01880 145 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 13 141 - -
Cca03g01880 145 MobiDBLite consensus disorder prediction 1 36 - -
Cca03g01880 145 Pfam VQ motif 39 64 IPR008889 -
Cca03g01880 145 MobiDBLite consensus disorder prediction 1 21 - -
Cca03g01880 145 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 13 141 IPR039335 GO:0051091
Cca03g01880 145 MobiDBLite consensus disorder prediction 59 117 - -
Cca03g01880 145 MobiDBLite consensus disorder prediction 88 102 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01880 - - ccaj:109815635 274.633