Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01876 ATGGCAATCCTTAAGATAACCAAAAAGCACCATAAGCGCTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCCTATGTCCAAGGTTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTTGGATCAGACCTTCTCAATTGGCAGTGATTTTCAGCTTTCTTGGACCTCCAACAATGGAGGGCACCTCTCAATTTCCCATCTTTCTCAGGCAACCAGACCCATTTGGTCTACCATCCCTGGACAGGCCTTTGTCTCAGCTGCACTGGTTGACACGGAAGTGGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGACAAAGATGTTCATATGGTTTGCAATCACCAAACGATTGAGGATATTCGGGTGATTGAGGATAGTGGAATGATCAATAGTCAATTTGATCATCCTTTGGAATGTGAAGTTGTAGATTCTCCTTCTGTGCATCAAGGGTTGGAAAAGAAAAGTGATGCACAAGAGATTCACCTTCCCACTTTGATGATCACAGGAAGGCTTTTCAACATGACTAAGAAGAGCAGAAGGTTTCAAAAGCATGGCATTCAAGCAACTATGCAGTTTGAAGCAAAAGGACCCTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTGAAGGTTGAAAAGCCTAACTTCATCTCACGCAACAAGGTCTCTAACACAGTTTCAGGAGTGTACCAGGGCTTTAAGAGGAGGCTGAGTAATCGGAAAAAGAGACTGGGTTGGTGCTGGTACCTTTCAAGGCCAAGAGGGTTTGTGCTAGTTTCATCGGTGGAGGAAGAGATAGAAGACTTGGATATCTCAAAATCAAAAGAATTCAATAGAGTTTGGTTGACATATGCAAGTGATGAGAATGAGAGGTTTTATGGTTTCGGGGAGCAGTTTTCTCACATGAATTTCAAAGGCAAAAGGGTGCCCATCTTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCTATTACCTTGGCTGCAAACTTGATCAGCTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATAACATCCAAAATGAGATCTGTCTACCTCGAAGGATATGATTATACTGTCTTCGATCTAACAAGACCTGACAGAGTACAGATACAGATACATGGAAACTCGGTTGAAGGGCAGATATTGCATGGGAACTCACCTTGTGAACTGATTGAACGTTTCACAGAAAACATTGGAAGGCTACCTGAGCTTCCGGATTGGATAATATCCGGTGCTATAGTTGGAATGCAGGGTGGCACAGATGCTGTACGCCATATTTGGGATGAACTAAGGACTTATGACGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAGAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATGCACACCGGTATTGGGGATGGAAGGAACTTCTCAAAGATCTTAGCTCTCAGCATATAAAAGTGATGACATATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAGCAAAACAAAAGGAGAAACCTCTTTGAGGAAGCGAAACAGTTGGACATATTGGTAAAAGACAGCTATGGAAATCCATACATGGTTCCAAACACAGCTTTTGATGTAGGAATGCTAGATCTAACACACCCAAAAACTGCACCTTGGTTCAAGCAAATTCTACAGGAAATGGTGGATGATGGAGTTACAGGATGGATGGCTGATTTTGGTGAAGGCCTACCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCACATAACAGATACCCAGAACTATGGGCCAAAATTAACAGAGAGCTTGTGGAAGAATGGAAAAGTAACTCCTTGAACAAGGTGAAGGAAGACCAAGAAGAGGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGCCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGCTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTTCTGAGCAGTGGAATTTCTGGTTATGCCTTTAATCACAGTGACATTGGAGGATACTGTACAGTAAACTTACCTATAGTTAAATATAGTAGAAGTGAAGAATTGCTTTTGAGATGGATGGAGCTAAATTCTTTTACCACAGTCTTCCGCACCCATGAAGGAAACAAACCATCATGTAACAGCCAGTTTTACTCAAATCAACAAACTTTCTCTCATTTTGCGCGCTCAGCAAAAGTATACGTAGCATGGAAATTTTACCGACTTCAACTGGTGAAGGAAGCTGCACAGAAAGGATTGCCCGTATGTCGCCACCTATTTCTTCATTATCCGAATGATGAACGTGTGCATCACTTGAGTTATCAGCAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTGCCTGTGCTTGACAAAGGAAAGAAAAAAGTCAAAGCTTATTTTCCGTTGGGAGAGAGTAGCAATTGGCTCCATATCTGGACAGGAAAAGTATTTTCCAAACAAGGAAGTGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTATTTGTTAAGGTTGGATCCCTTGTTGGAGAAACCTTTTTGAATAACCTAAGAAATTTAGGCATTCTTTCATAA 2652 0.4238 MAILKITKKHHKRFNNPFPSSVSTTIPYVQGSLFFNSKRVPLDQTFSIGSDFQLSWTSNNGGHLSISHLSQATRPIWSTIPGQAFVSAALVDTEVEESRGSFLVKDKDVHMVCNHQTIEDIRVIEDSGMINSQFDHPLECEVVDSPSVHQGLEKKSDAQEIHLPTLMITGRLFNMTKKSRRFQKHGIQATMQFEAKGPSVYARYWVLFNQKTNHEVGFQVKVEKPNFISRNKVSNTVSGVYQGFKRRLSNRKKRLGWCWYLSRPRGFVLVSSVEEEIEDLDISKSKEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLISYRAGGDWSTTYAPSPFYITSKMRSVYLEGYDYTVFDLTRPDRVQIQIHGNSVEGQILHGNSPCELIERFTENIGRLPELPDWIISGAIVGMQGGTDAVRHIWDELRTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDAHRYWGWKELLKDLSSQHIKVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDSYGNPYMVPNTAFDVGMLDLTHPKTAPWFKQILQEMVDDGVTGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINRELVEEWKSNSLNKVKEDQEEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYSRSEELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNQQTFSHFARSAKVYVAWKFYRLQLVKEAAQKGLPVCRHLFLHYPNDERVHHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSNWLHIWTGKVFSKQGSEEWVEAPIGYPAVFVKVGSLVGETFLNNLRNLGILS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01876 883 Gene3D - 811 863 IPR013780 -
Cca03g01876 883 PANTHER SULFOQUINOVOSIDASE 29 881 - -
Cca03g01876 883 CDD GH31_glucosidase_YihQ 418 756 IPR044112 -
Cca03g01876 883 Pfam Glycosyl hydrolases family 31 401 867 IPR000322 GO:0004553|GO:0005975
Cca03g01876 883 SUPERFAMILY Glycosyl hydrolase domain 779 863 - -
Cca03g01876 883 CDD GH31_N 288 418 - -
Cca03g01876 883 Gene3D glycosyl hydrolase (family 31) 247 403 - -
Cca03g01876 883 SUPERFAMILY (Trans)glycosidases 409 777 IPR017853 -
Cca03g01876 883 Coils Coil 515 535 - -
Cca03g01876 883 Gene3D Glycosidases 405 810 - -
Cca03g01876 883 SUPERFAMILY Galactose mutarotase-like 287 406 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01876 299 854 Glycoside Hydrolase AT3G45940 23.539 1.82e-21 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01876 - - gmx:100779005 1689.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01876 03 38121934 38127133 Cca03g01876 03 38121934 38127133 ECH