Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01872 ATGGACATTATTGGCAATATTTGTCTCTTGAATTTGCCAGAACCCATATTGGATTGTATTCTGAAGCTCCTTTCACCAATGGAACTCATTGAAATGTCTGAAGTGTGTACTTATTTAAGGGATAGGTGCCGAAGTGATCCTTTGTGGGAAGAGCATGTAAAGAAGAAATGGGGTAGAGTCATTGGTGGTGTTGCTTACGAGGAATGGAAATGGCATATTACAACAGCAAAGGAGAAAGGAATTGACCAACTTAGTCAACATGGCAATCAGAATAGATCACTAGGGTCTTTTTATGGTACTTGGCCTATGTTATACCTCAGGTCATATCTAGAAGATTGTAACCATCTTAGTAGCTCTTTGGCAAATTGCTTTATGATGACTTTGTATTTCTCTCTCGAGAATGGCAAGTTCTGGTTTCCAGCTCAAATTTACAGGGGATCATTGGCTCGTGACGCCTTAGTTAGATATAATTCCAAAACTGATAACTTTGAAGCAAGAGAACAAAATGGGGGTTGGCACTCAGTTGGTAGCAACATCCAATGGGATATCCTTAGAGTTCCCCCAGTTGATACCCCTCCATGTGATCGACACATCTCTGATTGTTTACAAGACTTAAAGCCAGGGGATCATATAGAGATCCAACGGAAGTCAAGAAGAGAAATTGCTTATGATTGGTGGTATGCTGTAATTGGTCACATGGAATCATGCAGTGAAAATGAGAAGTTGTGCCGTTGTGGCGACTCTGAGAAATTGATCGTGGAGTTCAAGCAATACTATAATGGATCAAGAATGAGACGAGTAATGCTACTCAGAAATGGGGAACAAAGTGGAGAAACAACTGCATACTATGGAGGAATTAGAAAGCTTCATAGTGCGGAAGAGATCCAAAGATGGGAGAAGCTCTTGCCACCACATCAAACTCCTTTTATACAGATGGGGGCGCGCATTGTGTGTCGGGGGATGGCACCACGAAGAGGAGTTCAATAA 987 0.4164 MDIIGNICLLNLPEPILDCILKLLSPMELIEMSEVCTYLRDRCRSDPLWEEHVKKKWGRVIGGVAYEEWKWHITTAKEKGIDQLSQHGNQNRSLGSFYGTWPMLYLRSYLEDCNHLSSSLANCFMMTLYFSLENGKFWFPAQIYRGSLARDALVRYNSKTDNFEAREQNGGWHSVGSNIQWDILRVPPVDTPPCDRHISDCLQDLKPGDHIEIQRKSRREIAYDWWYAVIGHMESCSENEKLCRCGDSEKLIVEFKQYYNGSRMRRVMLLRNGEQSGETTAYYGGIRKLHSAEEIQRWEKLLPPHQTPFIQMGARIVCRGMAPRRGVQ 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01872 328 ProSiteProfiles F-box domain profile. 6 52 IPR001810 GO:0005515
Cca03g01872 328 PANTHER ESTS AU081301(E20138) 5 306 - -
Cca03g01872 328 SUPERFAMILY F-box domain 5 60 IPR036047 GO:0005515
Cca03g01872 328 PANTHER CYCLIN-LIKE F-BOX 5 306 - -
Cca03g01872 328 Pfam F-box domain 9 50 IPR001810 GO:0005515
Cca03g01872 328 Gene3D - 6 109 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca03g01872 Cca-Chr3 38096367 38101085 Dispersed/Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01872 - - gmx:100797585 504.982