Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01871 ATGTCATCTGAGAAGAACAGAAAATTGGAGAAACATAAAGAATGCAAAGTTTCTTCTTCTCTCTTAGATTTGCCTGAGTGGATCTTGGATTGCATCCTTGAGTGCCTTTCACCACTGGACTTGTGCAGAGTGGCACAAGTGTGTACCAGTTTGAGGCTTAGAAGCAGAAGTGATGCTTTGTGGGAGAAACAAATCCATAAGAAATGGGGTCATATTCTTAGTGATGTTGCTCACCAAGAGTGGCAGTGGCACACAACGAAGATAATAAACACACAAAGCCTCTTGTTACAGCAGAATCAGAGTGGTTCATGTGGCACTTTCACTGGTGTTTGGCCTTTCTTACACTTTCATTCTTATTTGAAAAATTTCGTTGACTTGATTAGTTTTTTTAGAAGTTGTTCAAAAATGGCTTTGTATATATGTCTTGAAAGTGGCCGCTTTTGGTTTCTAGTTCAAGTTTGTAAGATTTCAAGACTATTCTATTATGATGCCATTGTCAGCTATGACTCTAGAACAGACACCTTCCGGGCAAGCTCTCCAACTGGTGGATGGAGAATGATTGAAGTAAATGTTCCGTGGGATAGGTTGAGATTATCACCGGTTGAAACTTCTACAAGGGAGTTTTATATGTCTAACTGTAGGAATGATTTGAAACCAGGAGATCAAATTGAGATTCAGATGAGAAGTCGCCAGAGCACCACTTATAATTGGTGGTATGCTGTAATTGGTCATTTGGAAACATGTGACGAGGATGTGAATCATTGCCATTGCCAATATAGTGGGGATCTAATATGA 795 0.3962 MSSEKNRKLEKHKECKVSSSLLDLPEWILDCILECLSPLDLCRVAQVCTSLRLRSRSDALWEKQIHKKWGHILSDVAHQEWQWHTTKIINTQSLLLQQNQSGSCGTFTGVWPFLHFHSYLKNFVDLISFFRSCSKMALYICLESGRFWFLVQVCKISRLFYYDAIVSYDSRTDTFRASSPTGGWRMIEVNVPWDRLRLSPVETSTREFYMSNCRNDLKPGDQIEIQMRSRQSTTYNWWYAVIGHLETCDEDVNHCHCQYSGDLI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01871 264 SMART fbox_2 24 64 IPR001810 GO:0005515
Cca03g01871 264 Gene3D - 7 97 - -
Cca03g01871 264 SUPERFAMILY F-box domain 12 85 IPR036047 GO:0005515
Cca03g01871 264 PANTHER ESTS AU081301(E20138) 4 263 - -
Cca03g01871 264 PANTHER F-BOX PLANT-LIKE PROTEIN 4 263 - -
Cca03g01871 264 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Cca03g01871 264 Pfam F-box domain 21 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01871 Cca-Chr3 38085744 38087611 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01871 - - gmx:100795992 409.068