Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01863 ATGATAACAGCCTTGGACCTCTACCACGTGCTGACCGCCGTGGTACCACTCTACGTGGCCATGATCCTGGCCTACGGCTCCGTCAAGTGGTGGAAGATCTTCACGCCGGACCAATGCTCCGGCATAAACCGCTTCGTGGCGCTCTTCGCCGTCCCCCTGCTCTCCTTCCACTTCATCGCGGCGAACAACCCCTACGCCATGAACTACAAGTTCATAGCGGCGGATTCGCTGCAGAAAGCCATCGTCCTGGGCGTGCTCTTCCTCTGGTCGAGGACCAGCTCGAGAGGGTCCCTGGAGTGGTCCATCACGCTCTTCTCCCTCTCCACGCTCCCCAACACGCTCGTCATGGGAATCCCCTTGCTCAAGGGCATGTACGGCGACGCCTCGGGGACCCTCATGGTTCAGATAGTGGTGCTCCAGTGCATCATATGGTACACCCTCATGCTCTTTCTGTTCGAGTACCGAGGGGCCAGGCTTCTTATCGTGGAGCAGTTTCCCGACACCGCTGGCTCCATTATTTCCTTCAAGGTCGACTCTGATGTTATCAGTTTGGATGGGAAGGAGCCGCTTCAGACTGAGGCTGAGGTTGGTGACGATGGCAAGTTGCATGTCACCGTTCGAAAGTCCACCAGCTCCAGGTCTGACATTTTCTCTCGCCGCTCCCATGGCCCCAACTCGCTTTCGCTCACGCCACGCCCTTCCAATTTGACCAATGCCGAGATTTACTCGCTCCAGAGTTCCCGGAATCCCACGCCGCGAGGCTCCAGTTTTAACCACACCGATTTTTATTCCATGGTCAATGGAGGGAGGAATGTGAGCCCCAGGCAGAGTAATTATGGGTTTGATGAGGAGAGTGGAGGGAGGGGTAATGGCTACCCTGCTCCTGCCAATGCTGGGATCTTCTCTCCGGTGGCTAAGAAGAAGGGTGACCctgctgctgctgctgctgctgctgctgctgctgctgctggtggtggtggtggtggtggtggtggCAAGGATCTTCACATGTTTGTGTGGAGTTCAAGTGCTTCTCCGGTGTCCGAAGGTGGAATCCATGTATTCAGAGGTGGGGATTTTGGGAATGACCAGCTTCCTGCTACTGGTGTCCCTCACCACAAAGATTATGATGAATTTGGTCACGACGAGTTTAGCTTCGGGAACAGAACCGTGGCTAATGGTGTGGACAAGGAAGGGCCAGTACTTTCGAAGATTGGTTCAAGTTCCACGGCTGAGCTTCACCCCAAAGCTCAAGGTGAATCCAAACCCACGTCCATGCCACCCACAAGTGTTATGACAAGACTCATTTTGATCATGGTTTGGCGGAAGCTGATTAGGAACCCTAACACATATTCCAGCCTCTTTGGTCTTGCTTGGTCTTTGATCTCGTTCAAGTGGAATGTTGCTATGCCCGCGATTGTTGCTCAATCAATAGCAATTTTATCTAATGCTGGCCTTGGGATGGCCATGTTTAGCTTGGGGTTATTCATGGCATTGCAGCCAAAGATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCTATGGCAGTTCGTTTCCTTACTGGACCTGCAGTCATGGCTGTTGCTTCAATCGTTGTAGGGCTCAGGGGAGTTCTGTTGCACATTGCTATTGTACAGGCTGCTCTGCCTCAAGGGATTGTCCCTTTTGTGTTTGCTAAGGAATATAATGTTCATCCGGACATACTCAGCACTGGGGTTATATTTGGGATGCTAATCGCTCTTCCAATTACGCTAGTTTACTACATTTTGCTTGGGCTTTGA 1782 0.5022 MITALDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIAANNPYAMNYKFIAADSLQKAIVLGVLFLWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDVISLDGKEPLQTEAEVGDDGKLHVTVRKSTSSRSDIFSRRSHGPNSLSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGGRNVSPRQSNYGFDEESGGRGNGYPAPANAGIFSPVAKKKGDPAAAAAAAAAAAAGGGGGGGGGKDLHMFVWSSSASPVSEGGIHVFRGGDFGNDQLPATGVPHHKDYDEFGHDEFSFGNRTVANGVDKEGPVLSKIGSSSTAELHPKAQGESKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLAWSLISFKWNVAMPAIVAQSIAILSNAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01863 593 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 593 - -
Cca03g01863 593 MobiDBLite consensus disorder prediction 406 427 - -
Cca03g01863 593 TIGRFAM 2a69: auxin efflux carrier 1 593 IPR014024 -
Cca03g01863 593 MobiDBLite consensus disorder prediction 213 232 - -
Cca03g01863 593 Pfam Membrane transport protein 9 588 IPR004776 GO:0016021|GO:0055085
Cca03g01863 593 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01863 Cca-Chr3 37969563 37973255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01863 1 584 Organic Solute Cotransporters AT1G73590 65.571 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01863 K13947 - gmx:100820506 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01863 03 37969563 37973255 Cca03g01863 03 37969563 37973255 ECH