Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01850 ATGAAGCGTCCGGCGAGCggtgagggtgagggtgagggtgagggtgagATGAAGATGAAGaaggcaaaggcaaaggcaaaggcggtggaaagcaagggcCTGGGTTGCTTGGACTCAAACCTTGTGTTCGAGGTGCTGAAGCACGTGGACGCGCGGACGCTGGGCATGGCGGCCTGCGTGAACAAAGAGTGGCAGAAGACGGCGCAGGACGAGAGGCTGTGGGAGCTGATCTGCACCAAGCTCTGGGCAAACACGGGGTGCGGAGAGCAACAGCTACGATCGGTGGTCCTCGCTCTGGGTGGGTTCCGCCGCCTCCTTGCGCTCTATCTCTTCCCTCTCTCCAAGCCCCTCCGTTTGGGCAAAGACGAGCTTCACCTCTCTCTTTCGCTTCTCTCCATTCGTTACTTCGAGAACATCAATTTCAATAACACACCCACTTGA 441 0.4853 MKRPASGEGEGEGEGEMKMKKAKAKAKAVESKGLGCLDSNLVFEVLKHVDARTLGMAACVNKEWQKTAQDERLWELICTKLWANTGCGEQQLRSVVLALGGFRRLLALYLFPLSKPLRLGKDELHLSLSLLSIRYFENINFNNTPT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01850 146 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 118 144 - -
Cca03g01850 146 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN-RELATED 23 116 - -
Cca03g01850 146 SUPERFAMILY F-box domain 32 83 IPR036047 GO:0005515
Cca03g01850 146 Gene3D - 19 104 - -
Cca03g01850 146 Pfam F-box domain 37 75 IPR001810 GO:0005515
Cca03g01850 146 PANTHER F-BOX ONLY PROTEIN 48-RELATED 118 144 IPR045118 GO:0019005|GO:0031146
Cca03g01850 146 PANTHER F-BOX ONLY PROTEIN 48-RELATED 23 116 IPR045118 GO:0019005|GO:0031146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01850 Cca-Chr3 37834259 37834915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01850 K14495 - gmx:100801734 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01850 03 37834259 37834915 Cca03g01850 03 37834259 37834915 ECH