Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01827 ATGAGCTGGTGGTGGGCTGGAGCAATCGGCGCTGCCAAGAAGAAATTCGAGGAAGACGAGCCGCCGCGAACCTTCCAGAGCGTGGGACTCGTGATTGGCGTCACCGGTATCGTCGGCAACAGCCTCGCCGAGATCCTCCCCCTCGCTGATACCCCCGGCGGCCCATGGAAAGTCTACGGCGTGGCCCGCCGCCCCCGCCCGCCGTGGAACGCCGACCACCCAGTCGAGTATATCCAGTGCGACGTCTCCGATCCCGCCGACGCCGATGCCAAGCTCGCCGCTCTCTCCGACGTCACCCACGTCTTCTTCGTGTCGTGGACCAACCGCCCCACCGAGTCCGAGAATTCCGAGGTTAACGGCGCAATGTTGAGAAACGTGCTGCGAGCCGTTATCCCGAACGCCCCCAATCTCCGCCACGTGTCCCTCCAGACCGGCACCAAGCACTACCTCGGACCCTTCGAACTCATCGGCAAGATCGAATCGCACGAGCCACCTTTCACGGAGGATCTGCCGCGTTTGGACGCGCCCAATTTCTATTACACCCAAGAAGACATCCTCTTTGACGAAGTCAGTAAGAAGGAGGGTTTAACTTGGTCTGTTCACAGACCCCAAACAATCTTCGGTTTTTCTCCCTATAGTTTGATGAACGTGGTAGGGACTCTCTGTGTTTACGCCGCGATTTGCAAGCACGAGGGGGTTCCGTTGAGATTCCCCGGCACGAGGAGCGCGTGGGAGGGTTACTCTTGTTGCTCCGACGCGGATTTGATTGCGGAGCAGCACATTTGGGCCGCGGTGGACCCCTACGCGCGCAACGAGGCGTTTAACTGCTCCAACGGGGATGTGTTCAGGTGGAAGCATCTTTGGAAGGTGTTGGCGGAACAGTTTGGGATCGAGGAGTATGGCTTTGTGGAGGAAGGTTCCCGTTTGAGGTTGTCGGAGCTTATGAAGGATAAGGGTCCTGTTTGGGATGAGATTGTGAGTGAGAATCAGCTTCTGCCTACTAACCTTGATGAGGTTGGTCTTTGGTGGTTTGTGGATGTTATTTTCTCTGTGGAGGGCATGGGCTTATTGGATAGCATGAACAAGGCTAAGGAACATGGCTTTTTGGGATTCAGGAATTCCAAGAATTCGTTTGTGAGTTGGATAGACAAGACCAAGGCTTATAAAATTGTGCCGTGA 1179 0.5589 MSWWWAGAIGAAKKKFEEDEPPRTFQSVGLVIGVTGIVGNSLAEILPLADTPGGPWKVYGVARRPRPPWNADHPVEYIQCDVSDPADADAKLAALSDVTHVFFVSWTNRPTESENSEVNGAMLRNVLRAVIPNAPNLRHVSLQTGTKHYLGPFELIGKIESHEPPFTEDLPRLDAPNFYYTQEDILFDEVSKKEGLTWSVHRPQTIFGFSPYSLMNVVGTLCVYAAICKHEGVPLRFPGTRSAWEGYSCCSDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEEYGFVEEGSRLRLSELMKDKGPVWDEIVSENQLLPTNLDEVGLWWFVDVIFSVEGMGLLDSMNKAKEHGFLGFRNSKNSFVSWIDKTKAYKIVP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01827 392 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 1 392 - -
Cca03g01827 392 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 1 392 - -
Cca03g01827 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 298 IPR036291 -
Cca03g01827 392 CDD 5beta-POR_like_SDR_a 28 329 - -
Cca03g01827 392 Gene3D - 27 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01827 Cca-Chr3 37509471 37511825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01827 K22419 - gmx:100813467 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01827 03 37509471 37511825 Cca03g01827 03 37509471 37511825 ECH