Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01798 ATGCTGAAGCCTTTTGTTTGTGGCACTTTTCGTCACCATGAAGAAGATGGTGTACCATGTTCAAGCCCCAAGAAGTCAAAAAGAAAAGATAACAAAAACCCTTACTCCAATCGAGGGTTGGACAAGTTTTCTGCACTTTTGGCTGATCTTGACGAGAGAAGGCAAAAGGTTTACTCACAGATGAGTCCTCACGAGATATCTTTGGTTCGGTTTGCGTATTCTAGCAACGATGATTTCGTTCCCATCGTGGTGAAGGTGAAAAACAAGGATCAGAAGAAACACAAGAGCGAAGAACTCGGGGTGAGACACTTGCAATCTTTCTCGGAGCAGTTGGAGAAATCTGCTGAAGAAGCAACCGTTGAAGAAAGGAAGCAACAACCAAGGTCGTTGGAATCACATCATCATAAGAAGGATTTTATTTTTGGCTTTTCTTGGAACATGTTCAAGTGGCCATCTTTCTACGTGCCTGTGGTTGTGATACTGATTTTGGTTTTCTTGACCGTGTTTGGGAGATCCGTTGCAACACTTTGCACATGTGTCGTGTGGTATTTGGTCCCCATGTTGAGTGAATATAAATATAATAGCTCAAAAGCAAGGAAATCGATTATGAATTCGAAGAAGAAGGATTATGTGAGGGGGTGGTTGAATGAAATGAAGAATCCTCGTGAAGAGTTAGCTTCTCCAACAAGTGGTGATTCCAAGGCTTATAATAATAATATTGGCAAGAGATCAGGGAAGCATGGCCACCAGAAAAGCTGGTAA 762 0.4199 MLKPFVCGTFRHHEEDGVPCSSPKKSKRKDNKNPYSNRGLDKFSALLADLDERRQKVYSQMSPHEISLVRFAYSSNDDFVPIVVKVKNKDQKKHKSEELGVRHLQSFSEQLEKSAEEATVEERKQQPRSLESHHHKKDFIFGFSWNMFKWPSFYVPVVVILILVFLTVFGRSVATLCTCVVWYLVPMLSEYKYNSSKARKSIMNSKKKDYVRGWLNEMKNPREELASPTSGDSKAYNNNIGKRSGKHGHQKSW 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01798 253 MobiDBLite consensus disorder prediction 221 253 - -
Cca03g01798 253 PANTHER ZCF37 1 253 IPR045880 -
Cca03g01798 253 MobiDBLite consensus disorder prediction 226 240 - -
Cca03g01798 253 PANTHER PROTEIN, PUTATIVE-RELATED 1 253 - -
Cca03g01798 253 MobiDBLite consensus disorder prediction 14 36 - -
Cca03g01798 253 Coils Coil 104 124 - -
Cca03g01798 253 MobiDBLite consensus disorder prediction 14 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01798 Cca-Chr3 37192020 37193563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01798 - - gmx:121174763 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01798 03 37192020 37193563 Cca03g01798 03 37192020 37193563 ECH
Cca05g00090 05 2028509 2029696 Cca03g01798 03 37192020 37193563 PCT