Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01797 ATGGTGTTTGGGCAAGTAGTAGTTGGTCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTTCTCAGTCTAATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCTGCTAATGATTCATTACCCTATGAATGTGCTGTGAACATTGAGGATCTTGTGAAACTAAGTGATGTAATGGTGGAACATTCGCTTGGTCCAAATGGGGCAGGTCTTGTGTATTGTATGGATTATCTAGAGAAAAATATTGACTGGTTGCAAGCAAAACTGGAACCTCTTTTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTATTTTTTCTTCATTCAAATGCCAAGAATGTCATCTTGAAACTCATAAAGAAATTGAACCTAAGGTTAACTGCGATGCATTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGCTTTTATCCTTGTCCACAATGCTACATCTGGAGCTCCCTCACATAAATGTCTTGTCAAAAATTGATTTAATTGAGAGCTATGGAAGGCTAGcatttaaccttgatttctatacagacgtgcaagatttgaaatatttacaataccatcttgatcaggatcctcgctctgctaagtacagaaagctcacaaaggaactttgtgaagttattgaaaacttcagtcttgtgagttttacaaccttggatattcagGACAAAGAAAGTGTAGGGAATTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGGAATTTAGTGAAGCTTATAGACAAAAGCAATGGGAATCTACAGTTGCAGCAGTGCAAGAGAAAGAATGACACCTTGATATTGCACAGGTCATTTATTGTGAGAGTTTGGATTTTCGTCCTTATAGTAGTGAAGATCATGAAAACATAA 966 0.293 MVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGAGLVYCMDYLEKNIDWLQAKLEPLLKDHYLLFDFPGQVELFFLHSNAKNVILKLIKKLNLRLTAMHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGRLAFNLDFYTDVQDLKYLQYHLDQDPRSAKYRKLTKELCEVIENFSLVSFTTLDIQDKESVGNLXXXXXXXXXXXXXXXXXXXXXXXXXGNLVKLIDKSNGNLQLQQCKRKNDTLILHRSFIVRVWIFVLIVVKIMKT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01797 321 CDD GPN2 3 247 - -
Cca03g01797 321 Gene3D - 4 258 IPR027417 -
Cca03g01797 321 Coils Coil 247 247 - -
Cca03g01797 321 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 248 IPR027417 -
Cca03g01797 321 Pfam Conserved hypothetical ATP binding protein 7 248 IPR004130 -
Cca03g01797 321 PANTHER GPN-LOOP GTPASE 2 1 248 IPR030231 -
Cca03g01797 321 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 248 IPR004130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01797 Cca-Chr3 37184717 37187973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01797 K24104 - gmx:100799782 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01797 03 37184717 37187973 Cca03g01797 03 37184717 37187973 ECH