Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01794 ATGGCTGAGTGTGGTGGTGCCAACAAAAAGACAAAGCAGTCTCAAGAGGGTCAGATTCAACCACATCCAGTAAAAGAGCAATTAAACGTTGATTATTGCATGAGATGTCCTCCACCTTGGCGTGAATCAGTGGTACTAGGATTCCAGCATTATATTATGACTCTTGGCATGACCGTTCTGATTCCAACTGTGCTTGTTCCTGAAATGGGTGGAGGCGATGCTGAGAAGGCCAAGGTGATACAGTGTCTATTGTTTGTTTCTGGAGCAAGTACATTTCTGCAAACCTGGTTCGGAACACGATTGCCAACAGTAGTTGTTGGTTCATTCAGTTACATAATACCCATCATGTCAATTGTGCATGCCAAGAGATACAGAACATATACTGATCCTTATGAGAGGTTCACTCACACAATTAGAGGGATACAAGGTGCCTTGATCGCAAGTGGATGTTTCCATGTAGTTATGGGATTCTTGGGACTTTGGAGGGGTGCTGTCAGGTTCCTTAGCCCACTTTCTGTAGTCCCTTATGTAACTTACACTGGCATCGGTCTCTATCATCTTGGATTCCCAATGCTGACGAACTGTGTTGAAGTGGGGCTTCCAGCACTAATTGTTATGGTTTTCATCTCACAGTATCTTAATCCCATTATTAGCCCCAAGAGGCCAATATATGACCGATTTGCGGTTCTGTTTACCACTGCAATTGTATGGTTATTTGCACAGCTTCTGACTTCAACCGGTGTATATAATAACAAGTCAGAAAGTACTCAGAATAGTTGCCGCACTGATCGCTCAGGTCTTATTAGTGGTTCCCCGTGGATATATCTACCTTTTATGCCCTTTCAATGGGGGAGGCCTACCTTCGACCTCGGAGAAGCTTTAGCTATGATAGCCGCTTCCTTTGTTTCTCTTTTTGAGTCCACTGGTACATTTTATGCTGCGGCAAGATATGCAAGTGGAACACCAGTGCCACCACATGTTATCAGCCGTGGAACTGGCTGGGTGGGAGTGGCTACTTTTCTCAGTGGCATTACTGGTTCTGTAACTGGGTGTACGGCATCAGTAGAAAACGCTGGATTAATGGCATTGACAAGAGCGGGAAGCCGAAGAATCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCTGTATTTGGAAAATTTGGAGCAATTTTTGCTTCCATACCTTTGCCAATCATAGCAGCACTAAACTGTGTATTCTTCGGATATGTCATTTCTGCGGGTCTTGATTTTCTCCAGTTCTGTAACCTCAACAGTTTCAGAACCAAATTCGTGTTGGGCTTCTCATTCTTCCTTGGCATCTCCATTCCACAATATTTCACAGAATACTATCATGTAAAGCATCAAGTTGGATGGCTCAATGATATGATTTGTGTGATCTTCATGTCGCACACGACGGTGGCAGCATTTGTTGCATTCGTTTTGGACATCACACTCTCACGTGATGATGAAGAAGCTCGCAAGGACTGTGGTTTGCCATGGGACACCATCTTCCGGTACCACCTTATCATCTTCTTCAGAGATTCTTCCCTCCAATTTTGTCTCTTTCTTTTTCCCTCGGCTAATACTCAAATTTTAGAGATGATTCGTGGTGCATATGAAGGGTTGATTGCTACACCCGAAAAGTTTAACGATTTCATCGATGGTGAAGATGAAAGAGTAAGTTCAAAGTTAAGGAAGGGAGTGAGACTATGGAGAAAATTAAAATATCAGCTTGTAGAGTACAATTCACTGCCAGCGTACTTGAAAGACAATGAATTCATATTGGGTTATTATCGATCAGAGTGGCCATTGAAGCAGATCTTCCTTAGCATTTTCTCAATTCATAATGAGACACTTAATGTCTGGACGCATTTGATTGGGTTCTTCCTTTTTCTCTTTCTCACCATATACACAGCTATGAGAGCTCCAATGGTCGCGGATTTCAATTCCGTTCAACATTTGTCAGAAATGATAGGGAAAGCTGATTTGAATAAGATTCGTTTAGAGCTCTTGAAATGCGTGCCTTCACTGCCCAACATGCATGATCTTCTCAAACTAAATGACTTGACTACATCTCTTCATTCTTTGGATTTCTCCTCATTATCAGGTTGGACTTTTGTGGAACTTCTCACCAATTGCTTGCCTGAGCAGTTTTCCCTGAATGGTCTGAAAGATGTCACCATGGTATCCCCCTTAGTAGTACAACCGATTACAAGGTGGCCTTTCTATGCCTTCTTAGGTGGAGCCATGTTCTGCTTGCTAGCCAGCAGCACATGCCACCTACTCGCATGCCACTCACAACGCCTTTCCTACATCATGCTCAGAATTGACTATGCTGGAATCGCTGCATTGATTGCAACTTCATTTTACCCTCCTGTGTATTACTCATTCATGTGCAACCCTTTTTTCTGCTTCCTCTACTTAGGCTTCATAACACTAATGGGGATAGCCACTATTATTTTCTCCCTTCTCCCATTCTTCCAAAAGTCTGAGTTCAGGAAGTACCGTGCTTCCCTCTTCTTTTTAATGGGATTTTCGGGCGTGGCACCCATAATACATAAGCTGATACTGCACAAGAATCAACCTGAGGCATTGCAGACTACAGGGAGCATACACACACTATCGTGA 2631 0.4303 MAECGGANKKTKQSQEGQIQPHPVKEQLNVDYCMRCPPPWRESVVLGFQHYIMTLGMTVLIPTVLVPEMGGGDAEKAKVIQCLLFVSGASTFLQTWFGTRLPTVVVGSFSYIIPIMSIVHAKRYRTYTDPYERFTHTIRGIQGALIASGCFHVVMGFLGLWRGAVRFLSPLSVVPYVTYTGIGLYHLGFPMLTNCVEVGLPALIVMVFISQYLNPIISPKRPIYDRFAVLFTTAIVWLFAQLLTSTGVYNNKSESTQNSCRTDRSGLISGSPWIYLPFMPFQWGRPTFDLGEALAMIAASFVSLFESTGTFYAAARYASGTPVPPHVISRGTGWVGVATFLSGITGSVTGCTASVENAGLMALTRAGSRRIIQISAGFMIFFSVFGKFGAIFASIPLPIIAALNCVFFGYVISAGLDFLQFCNLNSFRTKFVLGFSFFLGISIPQYFTEYYHVKHQVGWLNDMICVIFMSHTTVAAFVAFVLDITLSRDDEEARKDCGLPWDTIFRYHLIIFFRDSSLQFCLFLFPSANTQILEMIRGAYEGLIATPEKFNDFIDGEDERVSSKLRKGVRLWRKLKYQLVEYNSLPAYLKDNEFILGYYRSEWPLKQIFLSIFSIHNETLNVWTHLIGFFLFLFLTIYTAMRAPMVADFNSVQHLSEMIGKADLNKIRLELLKCVPSLPNMHDLLKLNDLTTSLHSLDFSSLSGWTFVELLTNCLPEQFSLNGLKDVTMVSPLVVQPITRWPFYAFLGGAMFCLLASSTCHLLACHSQRLSYIMLRIDYAGIAALIATSFYPPVYYSFMCNPFFCFLYLGFITLMGIATIIFSLLPFFQKSEFRKYRASLFFLMGFSGVAPIIHKLILHKNQPEALQTTGSIHTLS 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01794 876 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 11 550 - -
Cca03g01794 876 Pfam Permease family 42 447 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca03g01794 876 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g01794 876 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 11 550 - -
Cca03g01794 876 Pfam Haemolysin-III related 613 862 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01794 Cca-Chr3 37164508 37171647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01794 18 508 Organic Solute Cotransporters AT1G65550 61.829 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01794 - - ccaj:109797672 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01794 03 37164508 37171647 Cca03g01794 03 37164508 37171647 ECH