Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01789 ATGATGAACAaacaagaacaggaacaggaacaggaacaggaacagAGTGTGAAGATTGGCGTTGTCACAGTGACAGTGGTTGTGATGCTGTCATTGGTATGCACGAGTGGCGCAAGCACTGGTGGCAACCTCCACCCCTTAATTCTAATACCTGGTAACGGAGGGAACCAACTAGAAGCTAAATTGAGCAATGAGTACAAGCCCTCTAGTTTCATCTGCGACTCGTGGTACCCTCTTATCAAGAAAAAGAAAGGATGGTTCAGGATTTGGTTTGATACCAGTGTCATCCTTTCCCCTTTCACGCAATGCTTTACTGAACGCATGATGCTCCATTACCATCCACAACTCGATGATTACTTTAATACCCCTGGAGTTCACACCCGCGTCCTTCACTTTGGTTCCACCAACTCCCTTCTTTATCTCAATCCTCGACTCAAGCATATCACTGGATACATGGCACCCCTGGTAGATTCATTGCAAGAGCTTGGTTATGCTGATGGTGAAACTCTGTTTGGAGCCCCCTATGACTTTCGATATGGCCTAGCTGCTGAAGGGCACCCCTCCCAAGTGGGGTCCAAGTTCCTAAAAGACCTAAAGAATTTGATAGAAGAGGCAAGTGCTTCCAATGGGGGGAAGCCAGTGATACTTCTCTCCCATAGCTTAGGAGGCTTATTTGTACTTCAACTCCTAAACAGAAACCCCCTCTCTTGGCGCCAAAAATTCATCAAACACTTCATTGCTCTCTCAGCTCCATGGGGTGGTGCTATAGACGAAACGTACACCTTTGCATCTGGCAACACTCTAGGAGTGCCCCTAGTGGACCCTTTATTAGTGAGACCCGAACAAAGAAGCTCCGAGAGTAACCTATGGCTTTTGCCTAATCCCAAAGTATTCGGTCCCCAAAAACCAATAGTTATCACTCCCAATAGAACCTATTCAGCACATGATATGGTTGATTTTCTCAAAGACATTGGTTTTCCAGAAGGGGTATACCCTTATGAAACTCGCATTGTGCCCTTGATATCCAACATAGAAACACCACAAGTGCCTGTGACTTGTATTATGGGGACGGGCGTGAGAACCTTGGAAACGTTGTTTTATGGGAACGGTGATTTTGATGAACGGCCAGAAATTTCTTATGGGGATGGTGATGGAACGGTCAACATGTTGAGCTTGTTGGCGCTTCAGTCACTGTGGAAAGAGGAGGGAAATCAGTACCTGAAAGTGATCAAGATGGATGGGGTGTCGCATACTTCAATACTTAAAGATGAAGTTGCACTTAATCAAATAGTAGGTGAGATCAGTAAAATCAATTCCCGTGCTGAGCTTGATTTAATCAATGTGCTTTCGGAGTAA 1356 0.441 MMNKQEQEQEQEQEQSVKIGVVTVTVVVMLSLVCTSGASTGGNLHPLILIPGNGGNQLEAKLSNEYKPSSFICDSWYPLIKKKKGWFRIWFDTSVILSPFTQCFTERMMLHYHPQLDDYFNTPGVHTRVLHFGSTNSLLYLNPRLKHITGYMAPLVDSLQELGYADGETLFGAPYDFRYGLAAEGHPSQVGSKFLKDLKNLIEEASASNGGKPVILLSHSLGGLFVLQLLNRNPLSWRQKFIKHFIALSAPWGGAIDETYTFASGNTLGVPLVDPLLVRPEQRSSESNLWLLPNPKVFGPQKPIVITPNRTYSAHDMVDFLKDIGFPEGVYPYETRIVPLISNIETPQVPVTCIMGTGVRTLETLFYGNGDFDERPEISYGDGDGTVNMLSLLALQSLWKEEGNQYLKVIKMDGVSHTSILKDEVALNQIVGEISKINSRAELDLINVLSE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01789 451 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 38 437 - -
Cca03g01789 451 Pfam Lecithin:cholesterol acyltransferase 87 321 IPR003386 GO:0006629|GO:0008374
Cca03g01789 451 PANTHER LECITHIN:CHOLESTEROL ACYLTRANSFERASE FAMILY PROTEIN, EXPRESSED 38 437 - -
Cca03g01789 451 SUPERFAMILY alpha/beta-Hydrolases 41 434 IPR029058 -
Cca03g01789 451 Gene3D alpha/beta hydrolase 359 436 IPR029058 -
Cca03g01789 451 Gene3D alpha/beta hydrolase 93 273 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01789 21 451 Acyl Lipid Metabolism Gene Families AT1G27480 60.369 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01789 - - gmx:100804027 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01789 03 37091962 37094113 Cca03g01789 03 37091962 37094113 ECH