Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01780 ATGGACCTTCCGCCTCTCAGGAAGTGTCTCCAATTCTCCCGAAGAAACAAAAATCACATTCTCCTAATAGCCTTCTTCGCTGCCTCCGGTTACGGTGCCTACAAAGCCTACAATTCCCCTTATGTCGCTCGCAAACGACGCCGTCTCGCCAACCTCCTCCGAGCCTTCGTTTCCGTCGCCCAATTAATATCCAATTCCGCTGACACCCTCGCCGTTATCTCCAACGACCTAAGCCGTTTTCTCGCTTCTGATTCAGATCAAATCCCTAACAGTTTGAAGCAGCTATCGAAAATCGCAGCGTCCAAGGAGTTCTCATCGTCGCTCGCTAGGGTTTCCGAGGCTGTCACCATCGGGATTTTGCTAGGGTTTAGTAAATCACAGGCGGGTAACGATAATGACTGTCATACTCCCTTCGATATTACCGTGGATAGGGTGCTGGAGAAGCTTTTCTCCAAGGCTGGGACGGGTTTTGCGTCCGTTGTGGTTGGGAGCTTCGCGAAGAATTTGGTTTTGGGGTTCTTTGATGGTGATAAGGAAAATGCGAGGTCTCAATCGGATGTTCCTCGATGGGTGAATGTGATTTGCGATGAGAGGTGTGGGAGGGCTATAGGGGACTGGGTGCAAATTTTTGTGAGCACTGCGGTTGCTGTTTTTCTTGACAAGACTATGGATGTTAATACCTATGATGAAATGTTTGCCGGGATGTCCAATCCGAGGCACCAGGAGAAGGTGAAGGGGATTTTGGTTGCTATGTGTAATGGTGCTGTTGAGACTTTTGTTAGAACTTCTCATCAGGTTTTGACGAACCCAAGTGTGAGGTCGAATTCGGGTTTGTCTGTGTCCTCTGTTGTTGTTCCTGAAGATGGGTGTGTGAAACCGGAGGCGTTTCTGCGGCAATTCAGGGTTGGGAGCTCGGTTGGTGGGGTTCAGGATTATGGATGGATTGAACAGATTAAGTCAACGCTGTCGGTGCCGGCGAACCGGAGATTCATGCTTGATGTCACCGGGAGAGTCACATTTGAAACGGTGAGGTCGTTCGTGGTGTTTTTGTTGTGGAGAATATCTGATGGATGTAAGAGGAGTGTTAGTAAGGTTCATGATGAGGTTGTGGACAAAGGAATGGAGGTGGTTAGATATGTTGGAGCTAAGTCATCGGTCATTCTTACCTTGTGTCTTGCTTTGTATTTGCATATTGTGGGTGGTAGTAGGATTCTCTTGCCTGCTTAG 1227 0.4841 MDLPPLRKCLQFSRRNKNHILLIAFFAASGYGAYKAYNSPYVARKRRRLANLLRAFVSVAQLISNSADTLAVISNDLSRFLASDSDQIPNSLKQLSKIAASKEFSSSLARVSEAVTIGILLGFSKSQAGNDNDCHTPFDITVDRVLEKLFSKAGTGFASVVVGSFAKNLVLGFFDGDKENARSQSDVPRWVNVICDERCGRAIGDWVQIFVSTAVAVFLDKTMDVNTYDEMFAGMSNPRHQEKVKGILVAMCNGAVETFVRTSHQVLTNPSVRSNSGLSVSSVVVPEDGCVKPEAFLRQFRVGSSVGGVQDYGWIEQIKSTLSVPANRRFMLDVTGRVTFETVRSFVVFLLWRISDGCKRSVSKVHDEVVDKGMEVVRYVGAKSSVILTLCLALYLHIVGGSRILLPA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01780 408 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A10 1 407 - -
Cca03g01780 408 PANTHER ZGC:172139 1 407 IPR019141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01780 Cca-Chr3 36965148 36967058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01780 - - gmx:100810954 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01780 03 36965148 36967058 Cca03g01780 03 36965148 36967058 ECH