Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01778 ATGGGCGCCACCACCTGCAGCGCCTTCTTCACCCTCCGATCGCCAAGCTCCGTCGAGTCCAGCCTCCGCCACCACTCCTCTTCCGGTTGCGGAAAGTTCGATGGGGTGGCAAAGTGGTTCATCAACGGCGTCACCATGGCTTTCTTCGCCTCCCTAAACCGCTGCTATTGCATTCGCATCACCACCGAGGAAGACGCCGAAGACGCCAACGACTTGCCCTTGATGCTCAACGACGCCAACCTCCACCCTCAcgccgcctccgcctccgccgccgccAGGAGGAGGACGGCTAAAGGGAGCAAGACCCAAGCTGTTCTTCTCGAATGA 327 0.5443 MGATTCSAFFTLRSPSSVESSLRHHSSSGCGKFDGVAKWFINGVTMAFFASLNRCYCIRITTEEDAEDANDLPLMLNDANLHPHAASASAAARRRTAKGSKTQAVLLE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01778 108 PANTHER PROTEIN, PUTATIVE-RELATED 3 101 - -
Cca03g01778 108 MobiDBLite consensus disorder prediction 86 108 - -
Cca03g01778 108 PANTHER PROTEIN, PUTATIVE-RELATED 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01778 Cca-Chr3 36952465 36953189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01778 - - gmx:100811492 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01778 03 36952465 36953189 Cca03g01778 03 36952465 36953189 ECH
Cca05g00898 05 24213518 24214271 Cca03g01778 03 36952465 36953189 PCT