Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01754 ATGGGGAAAAGTAAGGTTGCAATAATGTGGATGCTTTGGGTCTTGTTTGGCTTGTGCAGCTTGCACTTGCATGCTGAAGCAAGAACATCATCACCTTTTGAAAGAGAAATCGAAGCCAAATTGAAGCAACTCAACAAGCCTGCTGTGAAAACCATAAAGAGTGAAGATGGAGATATTATTGATTGTGTCAACATCTATGATCAACCCGCTTTTGATCATCCAGCCTTAAAAAATCATACTATCAAGATGATGCCCGATTTTCTGCTAGAGTCCCAAAATTCAAGCACAGAAGAAGCATCGGAGTCAAGGACAGTGATATTTCAGACATGGCAGAAAAGTGGAAGTTGTCCAAAAGGAACAATCCCTATTCGCAGAATCCTAAGGGAAGACTTACTCAGAGCTGCTTCTCTCGATCGCTTTGGGAGGAAATCCCCTGCACTGTCCATCCCCAATGCAGGAGGCAGTTTATTTATTCCAGAAAATCGCTCGTCATCATATCTTGTGACGCTGGGATACAATTACATTGGTGCACAAGCTGATATCAATGTTTGGAATCCAAAGGTTAAAATGCCAGACGATTTCACCACAGCTCAAATCTGGCTTAAGAACAGCAACAATCCCTACTTCGAAAGCGTCGAATCAGGCTGGATGGTTAATCCCAAGCTATATGGTGACGGAGCCACACGGTTTTTTGCCTACTGGACCAGGGATTCATACAGGTCAACCGGTTGCTTTGATCTTACTTGCTCTGGATTCATACAAACTGGGCAGGCAGTGCTTGGTGGTACCATAGGCCCCATATCATCCCCTTTCGGCCCACAGTATGAAATTAACGTTGGAATGTTCCTGGACCCAAACACGGGAAATTGGTATCTTAAGTTAAAGAACAACATCGCTGTAGGGTATTGGCCAGCTGAAATATTGAATTCTTTAAGGCACAGTGCGATATTGGTTGAATGGGGGGGACAGGTGTCAAGTACAAACATAAAAAAGGAGACTCCTCATACGGAAACAACAATGGGGAGTGGAGATTTCGCAAGTGGTCGTTATTCGAACGCATGCTTCATGCGAGGTGTGAGGATTATGGATTATTCGCTTAAGCTTAAGTACCCTGATCCTGTAACTGCAATGGCTGATGAGCCCTACTGTTATAGCTCCCTCAATGAAGTCAAATATGGGGTCGAACCTATCTTTTATTTTGGAGGGCCCGGACGAAGTCCACCCTATTGTCCTTAA 1236 0.4409 MGKSKVAIMWMLWVLFGLCSLHLHAEARTSSPFEREIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYDQPAFDHPALKNHTIKMMPDFLLESQNSSTEEASESRTVIFQTWQKSGSCPKGTIPIRRILREDLLRAASLDRFGRKSPALSIPNAGGSLFIPENRSSSYLVTLGYNYIGAQADINVWNPKVKMPDDFTTAQIWLKNSNNPYFESVESGWMVNPKLYGDGATRFFAYWTRDSYRSTGCFDLTCSGFIQTGQAVLGGTIGPISSPFGPQYEINVGMFLDPNTGNWYLKLKNNIAVGYWPAEILNSLRHSAILVEWGGQVSSTNIKKETPHTETTMGSGDFASGRYSNACFMRGVRIMDYSLKLKYPDPVTAMADEPYCYSSLNEVKYGVEPIFYFGGPGRSPPYCP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01754 411 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 23 407 - -
Cca03g01754 411 Pfam Neprosin activation peptide 51 145 IPR025521 -
Cca03g01754 411 PANTHER ASLB (DUF239)-RELATED 23 407 - -
Cca03g01754 411 Pfam Neprosin 192 403 IPR004314 -
Cca03g01754 411 Gene3D - 180 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01754 Cca-Chr3 36637985 36641818 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01754 - - gmx:100804570 663.685