Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01753 ATGGAGAAAAGTAACGTCGTAATTGTAATGTTGGTGCTTTGGGTCTTGTGTGTGTCGTGTACCAAAGCAGGAAAATTGTCACCTTTGGAAATTGAAATCGAAGCCAAATTAAAACTTCTCAACAAGCCTGCGGTCAAAACCATTCAGAGTGAAGATGGAGATATTATTGATTGTGTGGACATCTACAAACAACCTGCTTTTGACCATCCTGCCTTAAAAAATCACACTATTCAGACGGTACCCAATTTTCTGCTAGAAATCCAAAATTCAAGAACAGAAGAAGCATCGGAGTCACAGTCAGTGGTATTCCAGACATGGCAGAAAAGTGGAAGCTGTCCAAAAGGAACAATCCCTATTCGCAGAATTCTAAAGGAGGACTTGCTCAGAGCTGCTTTCCTCGACCAATTCGGGCGAAAACCCTCTGCAGTGTTCAACAATTCAACTAAAACCTTCCACACCAATGACTCCAAACTATATGCTTCACAACGGCGCTCCGCATCATATCTTTCGTCAAAGGCACCCACTTATGGTGTACTAGCAGATATTAACATTTGGAATCCAAAGGTTGACTTGCCATATGATTTCACCACAGCTCAACTCCGGCTTAAAACCGACAATGGTCCTAATTATGAAAGCGTTGAAGCAGGCTGGATGGTGAATCCGATGTTATATGGTGACACAAACACCCGGCTATTTGCCTACTGGACTTCTACGGATTCATCCAAGTCAACAGGTTGCTTTGATCTTGCTTGTTCTGGGTTTGTGCAAACAGGCAGCACAGTAGCACTTGGTAGCACCGTAAAACCTGTGTCAACCACACATGGCCCACAGATGATGATGATTGATGAGAATTGGTGGCTTGCATTATGGAACGACAAGACTGTACCTATAGGTTATTGGCCTTGGGTGTTATTTGACAACTTAAGAGAGTTTGCTACGTCAGTTGAAATGGGTGGAGAAGTGGTGAGTTCGAACGTAAAACGTAGGCGCCCTCACACTGCAACAGGGATGGGAAGTGGAGATTTGATTAACGATCTAAAGGGGAGCGCATGCTTCATGCGTCATTTGAAGGTAAAGTACGCTGGTCGTGCGCTTCGGTACCCTTATGAACCAACAGCAGTGGCTGATGAACCCACCTGTTATAATTGCTACAATCAAATGGATGGCTTTGGAGGCCTCCCCGTCTTCTATTTTGGAGGACCCTATTGTCCTTGA 1215 0.4436 MEKSNVVIVMLVLWVLCVSCTKAGKLSPLEIEIEAKLKLLNKPAVKTIQSEDGDIIDCVDIYKQPAFDHPALKNHTIQTVPNFLLEIQNSRTEEASESQSVVFQTWQKSGSCPKGTIPIRRILKEDLLRAAFLDQFGRKPSAVFNNSTKTFHTNDSKLYASQRRSASYLSSKAPTYGVLADINIWNPKVDLPYDFTTAQLRLKTDNGPNYESVEAGWMVNPMLYGDTNTRLFAYWTSTDSSKSTGCFDLACSGFVQTGSTVALGSTVKPVSTTHGPQMMMIDENWWLALWNDKTVPIGYWPWVLFDNLREFATSVEMGGEVVSSNVKRRRPHTATGMGSGDLINDLKGSACFMRHLKVKYAGRALRYPYEPTAVADEPTCYNCYNQMDGFGGLPVFYFGGPYCP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01753 404 Gene3D - 167 279 - -
Cca03g01753 404 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 14 401 - -
Cca03g01753 404 PANTHER ASLB (DUF239)-RELATED 14 401 - -
Cca03g01753 404 Pfam Neprosin activation peptide 47 150 IPR025521 -
Cca03g01753 404 Pfam Neprosin 194 401 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01753 Cca-Chr3 36633043 36636728 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01753 - - gmx:100804570 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01753 03 36633043 36636728 Cca03g01753 03 36633043 36636728 ECH
Cca05g00862 05 23430733 23434422 Cca03g01753 03 36633043 36636728 PCT