Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01747 ATGATCGCAGCCTCCTACTCTCCTCTTCCTTCTACGTCTCCCACTCTCCATCGGAACTCACTGTTGTGTTCTGATTGCCATTCAAATTGTAACAAGTCTACATCTCAAGCATCTTTGTTTTTGTCTTCTGACAACACCAATAGAAGAAATGGCATGCTTGCTGGACCTCTTTCTGTGAGTTCCTCTTCCAGGAGAAACTTAGTTGGTCTGACTTCTTATTCTGCAGAGACGAGTGCTTATGATGTGACTGCTTTAGAATCTCCTTCCCATGTTGCGGAAGAAAAAGTGGGTGTGCTGCTTCTCAATCTTGGAGGACCAGAGACATTGAATGACGTTCAACCTTTTCTGTTTAATCTTTTTGCAGATCCTGATATCATTCGTCTCCCGAGGTTGTTTCGGTTTCTACAGCGGCCATTGGCAAAATTGATTTCTGTACTTCGGGCTCCTAAATCCAAGGAAGGCTATGCTGCTATTGGTGGTGGCTCTCCTTTGCGCAAAATTACAGATGACCAGGCACTTGCAATTAAAATGGCTTTGGAAGCAAAGGGCATCTCTTCAAATGTCTATGTTGGGATGCGGTACTGGTACCCATTCACTGAAGAAGCAGTGCAGCAAATTAAGAAGGACAGGATAACAAGGCTTGTGGTACTACCCCTTTATCCTCAGTTCTCTATATCCACTACTGGGTCAAGCATCCGTGTTCTGGAGCAGATATTCAGGGAAGATGCATATTTGTCTAGGCTTCCAGTTTCCATTATAAACTCTTGGTATCAACGACAAGGTTATATCAAGTCAATGGCTGACTTAATAGAGAAAGAGCTCCAGAGTTTTTCTGAACCAAAAGAGGTGATGATATTTTTCAGTGCCCACGGAGTACCTGTCAGTTATGTTGTGGATGCGGGGGATCCATACCGAGATCAAATGGAGGAGTGCATTTTCTTGATCATGCAAGAGTTGAAAGCTAGAGGAATTAGTAATGAGCACATTCTTGCTTACCAGGTTTATTTTGAACTCTTTCAACATGCTTTTCTGGCTTTTTCAGTTAAAATTGAGATTTCATATTTAATTGCTGGCCTATATTCTTGA 1086 0.4236 MIAASYSPLPSTSPTLHRNSLLCSDCHSNCNKSTSQASLFLSSDNTNRRNGMLAGPLSVSSSSRRNLVGLTSYSAETSAYDVTALESPSHVAEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISVLRAPKSKEGYAAIGGGSPLRKITDDQALAIKMALEAKGISSNVYVGMRYWYPFTEEAVQQIKKDRITRLVVLPLYPQFSISTTGSSIRVLEQIFREDAYLSRLPVSIINSWYQRQGYIKSMADLIEKELQSFSEPKEVMIFFSAHGVPVSYVVDAGDPYRDQMEECIFLIMQELKARGISNEHILAYQVYFELFQHAFLAFSVKIEISYLIAGLYS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01747 361 ProSitePatterns Ferrochelatase signature. 285 304 IPR019772 GO:0004325|GO:0006783
Cca03g01747 361 PANTHER FERROCHELATASE 26 333 IPR001015 GO:0004325|GO:0006783
Cca03g01747 361 TIGRFAM hemH: ferrochelatase 93 334 IPR001015 GO:0004325|GO:0006783
Cca03g01747 361 CDD Ferrochelatase_N 96 258 IPR033659 -
Cca03g01747 361 Pfam Ferrochelatase 95 333 IPR001015 GO:0004325|GO:0006783
Cca03g01747 361 Gene3D - 91 291 - -
Cca03g01747 361 SUPERFAMILY Chelatase 94 333 - -
Cca03g01747 361 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 26 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01747 Cca-Chr3 36577767 36582504 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01747 K01772 - gmx:100813423 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01747 03 36577767 36582504 Cca03g01747 03 36577767 36582504 ECH