Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01733 ATGTCCGACCCAACCTCCAAACCCAACGGAAACGGCGCGCCCGCCACCAACGGCAACGCCGGCCCCGTCAAGTCCCAACTCTACAACCCCAACCGTCAAGTTTACCGCCCGCAGTCGCGCTACCACGGGCGCCGCCGCTCCCACCGCAACCTctgctgctgctgctgcttctgGACCATCCTGGTGGTGCTCGGCGTGGCGCTCCTCGCCGCCATTGTCAGCGCCGCACTGTACGTACTGTACCGTCCCCACCGCCCTGAATTCTCCGTGACGAACCTCCGCATTGCGAGGATGAACCTGACGACGCCGTCGGACTCGCCCTCGCACCTCACCACGCTCTTCAACCTCACGCTCATCGCCAAGAACCCCAACAACCACCTCGTCTTCTTCTACGACGCATTCTCCGTGACGGTGTTCTCGAACTCCGTCCCCGTGGGAAACGGCTCCGTGGCGGCCTTCTCCTCCGACAAGAACAACCAGACGAGCCTCCGCGCGGTGCTCTCGGGGTCGCAGGATCTGGACACGGACTCCCTGAGCAGCGTGAGATCGGGTCTGAAGATGAAGAAGGGTTTCCCCGTTCagattcagatggacaccaaggtgaagatgaagatgGACTCGCTCAAGAGCAAGAAGGTCGGAATCAGAGTCACCTGCGACGGAATCAGAGGCACCGTTCCCGCCGGCAAGACTCCCGCGGTTGCATCCGTCGTCGACTCCGAGTGTAAGGTCGATCTTCGAATCAAGATCTGGAAGTTCTCCTTTTAA 768 0.5729 MSDPTSKPNGNGAPATNGNAGPVKSQLYNPNRQVYRPQSRYHGRRRSHRNLCCCCCFWTILVVLGVALLAAIVSAALYVLYRPHRPEFSVTNLRIARMNLTTPSDSPSHLTTLFNLTLIAKNPNNHLVFFYDAFSVTVFSNSVPVGNGSVAAFSSDKNNQTSLRAVLSGSQDLDTDSLSSVRSGLKMKKGFPVQIQMDTKVKMKMDSLKSKKVGIRVTCDGIRGTVPAGKTPAVASVVDSECKVDLRIKIWKFSF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01733 255 Gene3D - 78 218 - -
Cca03g01733 255 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 254 - -
Cca03g01733 255 Pfam Late embryogenesis abundant protein 120 219 IPR004864 -
Cca03g01733 255 PANTHER HARPIN-INDUCED PROTEIN 8 254 - -
Cca03g01733 255 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01733 Cca-Chr3 36463752 36465187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01733 30 248 EF-hand Containing Proteins AT5G21130 28.070 4.51e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01733 - - gmx:100775320 446.047