Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01709 ATGGAAGGATTAAAGCAGGCTGCGTATGAAACTACGGTGAAGCTCATGTTGGCTGCACTCGAACGCAAGTTGCTCCCTGACATTGTCACCAGAACACTCACGCGCTTCTTGTTGGCTACTCGCCTTCGCTCTGCTCACAAATCATTCTCTGAACTCCACCTCTCCGATCTCCTCCAATTTGCACATTCTTTACAAGATATGCCCATAGCAATCAATACCGAGAAGCCAAAATCTCAACATTATGAATTACCAACTGCTTTCTTTAGGATGGTGCTCGGAAATAATCTCAAATACAGCTGCTGCTATTTTTCTTCTGCCTCAATGACGCTGGATGATGCTGAAGAAGCAATGTTGAAACTATACTGTGAGAGATCAAACCTCAAAGATGGGCACACAGTACTTGACGTGGGATGCGGTTGGGGATCTCTGGCTTTATACATTGCCAAGAAGTACACTAACTGCAGGGTAACTGGAATCTGCAATTCCACAACTCAAAAGGCTTACATTGAGGAGAAGTGCCGGGATCTTCAGCTGCAAAATTTGGGTATTATTGTTGCTGACATTAGCACTTTTGAAATGGAAGCTTCTTATGACAGAATATTTTCCATTGAAATGTTTGAGCATATGAAGAACTATAAAGAGCTTCTCAAAAAGATATCCAAATGGATGAAAGAGGATAGCCTTTTATTTGTTCATCACTTCTGCCACAAAGCATTTGCCTACCACTTTGAGGACATAAATGATGATGATTGGATTACAAGATACTTCTTTACTGGAGGAACTATGCCTTCAGCAAATCTACTTCTTTATTTCCAAGATGATGTTACAGTCATCAACCATTGGTTAGTGAATGGGAAACACTACTCAAAGACAAGTGAAGAATGGCTCAAAAGAATGGACCATAGAATGACTTTGATCAAGCCAATTATGGAATCAACATATGGCAAGAATTCGGCTATCAAGTGGATTGCATATTGGAGAACGTTCTTCATAGCTGTTGCAGAACTTTTTGGATACAATAACGGTGAAGAGTGGATGGTTGCACATTTTCTTTTCAGAAAGAAATAA 1068 0.4036 MEGLKQAAYETTVKLMLAALERKLLPDIVTRTLTRFLLATRLRSAHKSFSELHLSDLLQFAHSLQDMPIAINTEKPKSQHYELPTAFFRMVLGNNLKYSCCYFSSASMTLDDAEEAMLKLYCERSNLKDGHTVLDVGCGWGSLALYIAKKYTNCRVTGICNSTTQKAYIEEKCRDLQLQNLGIIVADISTFEMEASYDRIFSIEMFEHMKNYKELLKKISKWMKEDSLLFVHHFCHKAFAYHFEDINDDDWITRYFFTGGTMPSANLLLYFQDDVTVINHWLVNGKHYSKTSEEWLKRMDHRMTLIKPIMESTYGKNSAIKWIAYWRTFFIAVAELFGYNNGEEWMVAHFLFRKK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01709 355 Pfam Mycolic acid cyclopropane synthetase 77 310 - -
Cca03g01709 355 Gene3D Vaccinia Virus protein VP39 71 349 IPR029063 -
Cca03g01709 355 CDD AdoMet_MTases 132 234 - -
Cca03g01709 355 PANTHER - 5 355 - -
Cca03g01709 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 354 IPR029063 -
Cca03g01709 355 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 5 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01709 Cca-Chr3 36163769 36166260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01709 78 337 Acyl Lipid Metabolism Gene Families AT3G23510 27.547 4.11e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01709 - - gmx:100818389 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01709 03 36163769 36166260 Cca03g01709 03 36163769 36166260 ECH